Chanodichthys erythropterus (predatory carp): 137018011
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Entry
137018011 CDS
T10334
Symbol
sox8b
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-8b
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137018011 (sox8b)
Transcription factors [BR:
cery03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
137018011 (sox8b)
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GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
137018011
NCBI-ProteinID:
XP_067238963
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Position
3:complement(55831230..55834081)
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AA seq
467 aa
AA seq
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MTEEQDKSSAEPPCSPAGSSSSMSQEESDSDAPSSPAGSTSHPSLMITRMGKKLEDEDDR
FPACIRDAVSQVLKGYDWSLVPMPARGSGALKNKPHVKRPMNAFMVWAQAARRKLADQYP
HLHNAELSKTLGKLWRLLTENEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKPGQSE
SDGGVDLTHHMYKAEPGMGRLASSSDHISDHTGQPHGPPTPPTTPKTDLHHGGKQDSKHE
GRRLLDSSRQNIDFSNVDISELSTDVISNIETFDVHEFDQYLPLSGHAGAVSTSEHGHGQ
NASSGGAYASSYSHGVSWSRKGPGASSSTGTSEVNQHRAHIKTEQLSPNHYSEHSPSHSE
YSIYSPHACATSVAASFASTQCDYTDLQSSSYYSPYTSYPSGLYQYPYFHSSRRPYGSPI
LNSLSIPPSHSPTTNXGISRFTPRYPGHKAQPRCCMVSIIMMKDSIS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggagcaggataagtccagcgcagagccgccctgtagcccggccggttcatcc
agctcgatgtctcaggaagagtcggactctgacgcaccttcatctcccgctggatctact
agccacccttcactcatgataacgagaatgggtaaaaaactggaggatgaggatgacaga
ttcccggcgtgtatcagagacgcggtgtcgcaggttctgaagggttatgactggtcttta
gtacccatgccagcgcgaggcagcggcgcgctcaagaacaaaccacacgtgaagagaccc
atgaacgcgttcatggtttgggctcaagccgcacgcaggaaactggcggatcagtatccg
cacctacacaacgccgagctcagcaaaaccctcgggaaactctggagactgctgacggag
aatgaaaagagaccgtttgtggaagaagccgaaagattgagagttcagcacaagaaagat
catccggattataaataccagccgaggcgacgaaagagtgtgaagccaggtcagagtgag
tctgatggtggcgttgacctaacccatcacatgtataaagccgaacctggaatggggcga
ttggcaagttcctcggatcacatctctgatcatacaggtcagcctcatggacccccgaca
cccccaacaacacccaaaacagacctccatcatggaggaaagcaagattcaaagcatgaa
ggtagacgtttgcttgacagtagtcgacagaatatcgactttagcaatgttgacatttct
gagctcagcacagatgtcatcagcaacatagaaacctttgatgtgcatgagtttgaccaa
tacttgcctctcagtggccatgccggagccgtttcgacctcagagcacggtcacgggcag
aatgccagctctggaggtgcttacgcttcatcttacagccacggggtttcctggagtcgc
aaagggcccggggcatcctcgtcaactggcacaagtgaagtgaatcagcacagagctcac
attaaaactgagcagttaagcccgaatcactacagcgagcactcaccctcacactccgag
tacagcatttacagcccacatgcatgcgccacctcagtcgccgcctcattcgccagcact
cagtgtgactatacagaccttcaaagctccagctattacagcccctataccagctaccca
tctggcctctaccagtacccatactttcattcctcacggaggccgtacggaagccccata
ctgaacagcttgtccattccgccctcccacagtcccaccaccaacnntgggatcagccga
tttacaccacgttatcccggccataaggcccagccacgttgttgtatggtgtccattatt
atgatgaaggacagcattagctga
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