Chanodichthys erythropterus (predatory carp): 137018853
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Entry
137018853 CDS
T10334
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04137
Mitophagy - animal
cery04140
Autophagy - animal
cery04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137018853 (hif1ab)
04137 Mitophagy - animal
137018853 (hif1ab)
04148 Efferocytosis
137018853 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137018853 (hif1ab)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
137018853 (hif1ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
137018853
NCBI-ProteinID:
XP_067239699
LinkDB
All DBs
Position
4:complement(1742371..1759322)
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AA seq
774 aa
AA seq
DB search
MDTGVVTEKKRVSSERRKEKSRDAARSRRGKESEVFYELAHQLPLPHNVTSHLDKASIMR
LTISYLRMRKLLSSDDTDKENEVESQLNGFYLKALEGFLMVLSEDGDMVYLSENVSKSMG
LTQFDLTGHSVFEFSHPCDHEELREMLVHRTVSKKTKEQNTERSFFLRMKCTLTSRGRTV
NIKSATWKVLHCAGHVRVQERSEGSGDSGFKEPPLTYLVLICDPIPHPSNIEVPLDSKTF
LSRHTLDMKFSYCDERITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQATT
GQYRMMAKKGGFVWVETQATVIYNPKNSQPQCIVCVNYVLSGIMEGDIVLSLQQTMTEPK
AVEKESHKVEDDVSEVDMLKLFKPENLKCPMECSDLYEQLKEEPEALTVLAPAAGDTIIS
LDFNNSDSDMQLVKDVPVYNDVMLPSSSEKLPISLSALTTSDPTPALSKLETGAEDFPFS
SASDHVPDSANTPSTSGLGSSGPNSPMDYCFQVDSDISSEFKLDLVEKLFAIDTEAKTPF
TNQGIEDLDLEMLAPYIPMDDDFQLRTPSPLDPLPSSSLSVSAMSSLFQPLPSPGSPASS
SSSSVKKEPSSRAPSPLHLLQEVCSAPVSPFSGSRDTSPTRSPTPQSSNQLNNRELSPKM
LAIQNIQRKRKLEEVTSLSEAVGLSALLQSVDSAIEPGKRAKVLEVKGSSVLGGNRTILI
LPSDVASRLLCSSLEGSGGLPQLTRYDCEVNAPVQDRHHLLQGEELLRALDQVN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagttgtcactgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tccagggatgcagcgcgatctcgcaggggaaaggagtccgaggtgttctacgagttagct
caccagcttcccctgccacacaatgtcacttcccacctggacaaagcctccatcatgagg
ctgaccatcagctatctgcgcatgaggaagctgctcagctctgatgacaccgacaaagag
aatgaggtggagagtcagttgaatggcttttatctgaaggccctggagggtttcctcatg
gtcctgtctgaggatggagacatggtttatctctctgagaatgtcagcaagagcatgggc
ctcacacagtttgatctgactggtcacagcgtctttgaattctcacacccatgtgaccat
gaggagttgagagagatgctggtccataggacagtatccaaaaagaccaaggaacaaaac
acagagcgcagcttcttccttcgtatgaagtgcacactcactagtagaggacgcactgtc
aatatcaagtctgctacttggaaggttcttcactgcgctggtcatgtccgtgtgcaggag
cgcagcgagggttcgggagactctggctttaaagagccccctctgacctaccttgtgctc
atctgtgaccccattcctcatccttcaaacattgaggttcctcttgacagcaagaccttc
cttagccgtcacactctggacatgaagttctcgtactgtgatgaaaggatcactgagctg
atgggatatgagccagatgatctgctgaacaggtctgtgtacgaatactatcatgccctg
gattcagatcacctcaccaagacacatcacaacctgtttgcaaagggccaggctaccaca
ggccagtaccgcatgatggctaagaaaggtggttttgtgtgggtggagactcaggccacc
gttatctacaatcccaagaattcacagccacagtgcattgtgtgcgtcaactacgttctc
agtggcattatggagggggacattgtcctgtccctgcagcagaccatgacagagcccaag
gctgttgagaaagagagccataaagtcgaagatgatgtctctgaggtggacatgctcaaa
ctcttcaagccagaaaacctgaagtgtcccatggagtgctctgacctttatgagcagctg
aaagaggaacctgaggccctcactgtgttggcgcctgcagcaggagacaccatcatctct
ctggacttcaacaactcagactctgacatgcagctggtgaaggatgtgcccgtctacaat
gatgtcatgctgccctccagcagtgagaagctgcccatcagtctgtctgctctgacaacc
agtgaccccaccccagctctgtccaaacttgagaccggagcggaagacttccctttcagc
tctgcctctgatcatgttccagactccgcaaacacaccctccacatctggactcggctcc
tcagggcctaacagccccatggattactgtttccaagtggactcagacatcagttctgaa
ttcaaactggacctggttgaaaaactttttgctattgataccgaagcaaagacccccttt
accaaccagggtatagaggatctcgacctagagatgctggctccatacatcccaatggat
gatgacttccagcttcgcaccccctctccactggatccgctcccctccagctctctctct
gtttctgccatgagctccctgttccagcccttaccctcccctggatctccagcctcttcc
tccagcagctcagtgaagaaggagccatcgtcacgggccccttcgcccttgcatcttctg
caggaggtgtgcagtgctcctgtctcacccttcagtggcagtcgggacacttcccccact
cgatcccccaccccacagagcagcaatcagctcaataacagagagctgtctccaaagatg
ttagccatccagaatatccaacgtaagagaaagctggaggaagtgacatcactttctgag
gctgttggactgagtgctttgcttcagagtgtggacagtgctatagagcctggaaaaagg
gcaaaggttttagaagttaaaggatcgagtgtgctcgggggaaacagaaccattcttata
ctgccctctgatgtggccagtcgtctgttatgcagttctttagagggcagcggcgggctg
cctcagctaacacgttacgactgcgaagtcaacgctcccgtgcaggaccgccatcatctg
ctccagggagaggagctcctgcgtgctctggaccaagtcaactga
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