Chanodichthys erythropterus (predatory carp): 137019048
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Entry
137019048 CDS
T10334
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
Enzymes [BR:
cery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137019048 (ddx1)
Spliceosome [BR:
cery03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
137019048 (ddx1)
Transfer RNA biogenesis [BR:
cery03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
137019048 (ddx1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137019048
NCBI-ProteinID:
XP_067240132
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Position
4:10918501..10926875
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AA seq
740 aa
AA seq
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MAAFGEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRSAVKTGGAVFNKWQMNPYDRSPAFAIGADGLCCQSREFKEWH
GCRSTKGVTKGKYYYEVACHDQGLCRVGWSTAQASLDLGTDKYGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYIDVDKGHVSFSKNGNDLGLAFEIPPQLKNQPFFASCVLKNAELKF
NFGDEPFKNQPKDGYVALNQASDGHVVKSSQTGSAKVSQVKSSSNAPKALIIEPSKELAE
QTLNNVNQFKKYVDNPKLRDLLIIGGVAAKEQLSILESGVDIVVGTPGRLDDLISTGKLD
LSQVRFLVLDECDGLLTAGYTDFIMRVYNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADRLWERLGKSHIRTDEVHTKDDTRPGAN
TPEMWSEAIKILKGEYAIRAIKEHKMDQAIIFCRTKIDCDNMEQYFIKQGGGPDKKGHQF
SCVCLHGDRKPNERKYNLERFKKQEVKFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRADRMGLAISLVAMEKEKVWYHVCASRGKGCYNTKLKENGGCTIWYNEKELLS
EIEEHLKCTITQCEPDIKVPVDEFDGKVTYGQRRATGGGLYKGHVDILAPTVQELANLER
EAQTSFLHLGYLPNQLFKAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcggcgaaatgggagtaatgcctgaaattgcacaggcggtggaagaaatg
gactggctgttgccaacagacattcaggccgaatccatccctctgattctgggtggagga
gacgtgctcatggccgctgagactgggagcggaaaaactggagccttcagtattccagtc
atccaaatagtctatgagactcttaaagaccagcaggaggggaagaagggacgtagtgcg
gtgaagacaggaggagcagttttcaataaatggcagatgaacccctatgacagaagccca
gcatttgctattggtgccgatggcctgtgctgtcagagcagagagttcaaagagtggcat
ggctgtcgttccaccaaaggagtcacaaaagggaagtattattatgaagtggcctgtcac
gatcaagggctgtgcagggtgggctggtccactgcccaggcatcactggacttgggaacg
gataaatatggatttggctttgggggaactggaaagaaatctcacaataagcagtttgat
agttatggagaggaattcactatgcacgacaccatcggatgctacatagatgtggataaa
ggccatgtgtcattctccaaaaatggcaatgatctgggtttggcttttgagatccctccg
caactgaaaaatcagcccttctttgcttcctgtgtgctgaagaatgctgaactgaaattc
aactttggtgatgaacccttcaaaaaccaacctaaagatggatatgtggccctgaaccag
gcttcagatggtcatgtggtcaaatccagccagacaggcagtgctaaagtgagtcaggtc
aaatccagttctaacgcccccaaagctctcatcattgagccgtctaaagagctggctgaa
caaaccctcaataatgtcaaccagttcaagaaatatgttgataatcccaaactaagggat
cttctgataatcggaggagtggccgctaaagaacagctctccattttagaaagtggggtt
gacattgtggttgggaccccgggcagactggatgatctcatatcaacaggaaagctggat
ctatcccaagtccgcttcctggtgctggatgagtgtgatggactcctcacagctggctac
accgacttcatcatgagggtctacaaccagatccctcaggtcacctcagatggcaagaga
ctacaggtgattgtttgctctgccacgctgcattcattcgacgtgaagaagctctcagag
aagatcatgcatttccccacatgggtggatctgaagggagaagattctgtaccagaaacg
gtccatcacgtggtggtgccagtcaacccaaaagctgacaggctttgggagagactggga
aagagccacatcaggactgatgaagttcataccaaggatgacacacgacctggagccaac
accccagagatgtggtcagaggccattaagattctgaagggagagtatgcaatcagagcc
attaaggagcataagatggatcaggccatcatcttctgcaggacaaagatcgactgcgac
aatatggagcagtacttcatcaagcagggaggaggtccagacaagaaaggacaccagttc
tcttgtgtctgtcttcatggtgacaggaaaccaaatgagcgcaaatataacttggagcga
ttcaagaaacaggaagtaaagtttctgatttgcacagatgtggctgctagaggaatcgat
atccatggtgttccttatgtgataaatgtgactctaccagatgagaagcagaactacgtt
catcgcattggaagagttggcagagcggacaggatgggtttggctatatccctggttgct
atggagaaagagaaagtgtggtaccacgtttgtgccagcagaggaaaaggctgctataac
accaaactcaaagagaacggaggatgcactatttggtacaatgagaaagagttgttgtca
gaaatcgaggaacatctgaaatgcaccattactcagtgtgaacctgacatcaaagtacct
gttgacgaatttgacggcaaagtaacatacgggcagcgcagggctaccggcggtggtctc
tataagggccatgtggatatattggccccaactgtacaggaactggccaacctggagaga
gaggcgcaaacttccttccttcatctcggctatctacccaaccagctctttaaagcattc
tag
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