Chanodichthys erythropterus (predatory carp): 137019129
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Entry
137019129 CDS
T10334
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137019129 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cery04121
]
137019129 (trim54)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
137019129 (trim54)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_5
TRIM_CC
DUF8512
zf-RING_6
CYP38_PsbQ-like
Sina_RING
CoiA_N
zf-RING_10
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
137019129
NCBI-ProteinID:
XP_067240325
LinkDB
All DBs
Position
4
Genome browser
AA seq
357 aa
AA seq
DB search
MNFTLDFKAGMGDSMENLEKQLICPICLEIFTKPVVILPCQHNLCRKCANDVYQASNSFW
QNRSSTTVSTVGRFRCPSCRHEVILDRHGVYGLQRNLLVENIIDIYKSETNRPLLPKTEQ
QQLMCDQHEEEKINIYCLTCETPTCSMCKVFGAHKDCDVAPLTVIYKRQKTELSDAIAVL
VAGNDRIQALISQMEDICRTVKENGRRQMQNISDKFDELFAIIEERKRELIETVGREQDR
KLGHVRSLMRRHGDHLEMSIKLVETAIQSMEEPQMAVFLQSAKEVFKKITDTAKASNIEQ
TEAGFESMDHFIINTENAADMLRGIDFQTAEDGEDSSDEAPEELTNSPGQSGESGRL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcactttggacttcaaagcagggatgggagactcaatggagaacttagagaag
cagctcatttgccccatctgtctggagatattcactaagcctgtggtcatcttaccctgc
cagcacaacctctgtaggaagtgtgccaatgatgtttaccaggcctctaactctttttgg
caaaaccggagctctaccactgtgtctacagtgggacgtttccgctgcccatcttgtcgc
catgaagtgatattggaccggcatggtgtatacggccttcagaggaacctgctagtggag
aatatcattgatatctacaaatcagagactaacaggccactcctacccaaaacagagcaa
cagcagctgatgtgtgaccagcatgaggaggagaagatcaacatctactgcctcacctgt
gagacaccgacatgctccatgtgcaaggtgttcggggctcacaaggactgtgatgtggcc
ccgttgacggtcatctacaagagacaaaagacagagctaagtgatgccatagccgtcttg
gtggcaggaaatgacagaatacaggccctgatctcacagatggaggatatttgtaggact
gtcaaggaaaatggtcggcgacagatgcagaacatctctgataagtttgatgaacttttt
gccatcatagaagagcgtaaaagggaacttatagagactgtcggccgtgagcaggaccga
aaactgggccacgtccgctcccttatgcgtcgtcacggagaccacttagagatgtccatc
aaactggtggaaactgccatccagtccatggaggaacctcagatggctgtgtttctgcag
agtgcaaaggaagtgttcaagaagatcacagacactgccaaggcctccaacattgagcag
acggaggcaggctttgagagcatggaccacttcatcatcaacacggagaatgcggccgac
atgctgagaggcatcgactttcaaacagctgaagatggagaagacagcagtgatgaagct
cctgaagaactgaccaactcacctggtcagagtggtgaatcagggagactctaa
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