Chanodichthys erythropterus (predatory carp): 137020116
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Entry
137020116 CDS
T10334
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cery03009
]
137020116 (rrp12)
Ribosome biogenesis [BR:
cery03009
]
Eukaryotic type
90S particles
Other 90S particles
137020116 (rrp12)
Pre-60S particles
Other pre-60S particles
137020116 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
DUF6031
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
137020116
NCBI-ProteinID:
XP_067241434
LinkDB
All DBs
Position
5:complement(19770145..19782577)
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AA seq
1282 aa
AA seq
DB search
MVKSGKLKSGAAQKIRRWKKGHSSDSNPETCRYRKAARSRYFSRPSEKSDLTVDALKLHN
ELQSGSLQRSDDLAAEAMEDQALTEKTSGTFLSGLSDCSNLTFRKVQRYWESNSAAHKEI
CAVLAAVTEVLRSQGGKETETEYFAALMTTLEAVDSSESLAAVAYLLNLVMKRMPAAVLK
KKFSDTAKAFMDVMSNHANSDSLSCLRWVLSCLATLLRKQELSVWSYPSTLQVYHGLLVF
TVHSKPKVRKAAQQGVCSILRYSDFMFSDNAPSHHPAAVTTAKFCCKELEQSGGSKEDTT
TLHVLGLLKDLLSAFPLNSVKSCCETLLRVMTLSHVLVTANAMQAFHKLFISKPSPSSMS
AELNAQIITALYDYVPSENDLQPLLAWLAVMEKAHVHLSSLQSSLSLGHLPRLFSVAMSC
LLSPHTQVVSAATQTLKTLINECVAARNAEIEPVLTNTSTGNGACILKMFHIVEEGLSYR
FHASWPFVLQILGCFYRAAGKQAHPFMIKSLQSLSDLRATPQFPFSGELDLAVGSAVESM
GPEVVLNAVPLLITGTDDDLEFPRSWLIPVIRDHVKNTQLAYFTSHFFPLANKLKQTADE
LEQSGQKLMAKVYQTLQMQIWTMLPGFCTKPTDLLASFKNIARPLGMALNDRPDLRLCIC
QALRTLINKSCETEEEKSELSRFSKNFLPILFNVYSQQPKPGEMASARMAVLETIRVYLT
ITDQKMVCTFLHKASERLNNADNSEFTRLAVIDLIVAMAPFVDEPSMTQTFELIKPFVES
KDAGIQKKAYRVLEEMCGGERASCKAFVLANLEQLKGMLLDSLTSAASPAKRPRLKCLIH
IVKQINEEHHDFITALLPEVILCTKEMSIGARKNAYSLLVEIGNAFLRFCGNTKDAINEF
LGHVYIGLTGSVTMITCTVLALTRLVFHYKDSIDVSSLEQLLHNVCLLLGCRTRDIVKAS
LGFLKVLLFSLDVKVLASHVNVIMEGISNMNDMRRHFRVKLKSIYTKMIRKFGFELVKSM
LPADQHKVLVNIRKTEARNKRRKLVTKTEEGDSDTEDETPKVKGESIEDILAETDSADSD
EDEKPKKGLKKPMKKGQAWLKEGVSDEPLNFLDPKAAQRVLATNPNLKKATRAEHGFKVT
SDGRLIIKEEDDDDDNKTKDAEMDDVLEEAGVKTRKNPKWKMHDDSDDDMNVKPTMKYKA
GGIGIHRPLGARPEFGKEYKSKKGKGDVKKEGKCDPYAYVPLKKSQLNRRKKAKLQGQFK
GMVRGAKKGALSGTRILKKRKA
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtctggaaaactaaaatctggagcagcccagaaaataaggcggtggaagaaa
gggcacagtagtgatagcaatccagagacatgtcgctatcgaaaagccgcgaggagccga
tatttcagccgtccctcagaaaaaagtgatctgacagtagatgccttgaaactccacaat
gagcttcagtcaggatctttgcagagaagcgatgatctggcagcagaagccatggaagat
caagccctcacagagaaaacctctgggacttttctcagtggactgtcagactgctccaac
ctcacttttagaaaagtgcagcgctactgggagtcaaactctgctgcacataaagagatc
tgtgctgtattggcagccgtaactgaagtgcttcgctctcaaggaggaaaggagaccgag
acggagtactttgcagccttgatgacgacacttgaggctgtagatagcagcgagtcactg
gcagctgttgcatacctccttaacttggtcatgaaaaggatgccagctgcagtgcttaag
aaaaagttctcggacacagccaaagccttcatggatgtgatgtcaaaccacgccaattct
gactctttgtcctgccttcgatgggtcttatcctgtctggcgactttgctgcgtaaacag
gaactgtcagtgtggagttacccatcaactctacaggtgtaccatggcctgctggtcttc
acagtacactctaaaccaaaggtgcgaaaggcagcacagcagggtgtttgctccatcctt
cgctacagcgacttcatgttctcagataatgccccgagtcaccacccagcagccgtcacc
acagccaaattctgctgcaaagaattggagcagtcaggaggcagcaaagaagacacaacc
actctccatgtgctgggtcttctgaaggacctgctgtctgcattccccctgaactcagtc
aagtcttgctgtgagacccttctccgtgtcatgaccctgagccatgtgctggtgaccgca
aatgcgatgcaggctttccacaagctcttcattagcaaacccagtccttccagtatgtct
gcagagctcaatgcccagatcatcacagctttatatgactatgttcctagtgagaatgat
ctgcagcctttactagcatggcttgctgtaatggaaaaggcccatgttcatctctccagt
ttacagagctctctgagtctcggtcatcttcctcgcctcttctcggtcgccatgtcgtgt
cttctatccccgcacacgcaagtcgtctctgctgcaacccagactcttaagactctgata
aatgagtgtgtagctgcccgtaatgctgagattgaacccgttctaacaaacacatcaact
ggaaatggggcttgcatcctgaagatgtttcatatcgtggaggaagggttgtcctatcgt
tttcatgcctcttggccgtttgtgctgcagatcctgggctgcttctaccgagctgcagga
aaacaggcccatcctttcatgataaagagtttgcagtctctcagtgacctgcgggccacc
cctcagttccccttttctggggagctggatctggctgtgggcagtgcggtggagagcatg
ggtccagaggtggtcctgaacgctgtgcccctcctcatcactgggacagatgatgacctt
gagttcccgcgcagctggctgatcccggtcataagagatcacgtgaagaacactcagctg
gcttacttcacatcacactttttccctttggcaaacaaacttaaacagacagctgatgaa
ctggagcagtcaggacagaagctgatggcaaaagtgtatcagactctacagatgcagata
tggactatgttacctggattctgcactaaacccaccgacctattggcatcattcaagaac
attgctcggcctctgggtatggccctcaatgatcgccctgacctccgcctgtgcatctgt
caggccttgcggactctcatcaacaagagctgtgagacagaggaagagaagtcggaatta
agtcgcttctccaagaacttccttcccatcctgtttaatgtctatagtcagcagcctaaa
ccaggagagatggcatctgctaggatggctgtcctggagacaatcagagtttacctcacc
atcacagaccagaagatggtatgcacgttcctgcacaaagcttcggagagactcaacaat
gcagacaactctgagttcacaaggcttgcagttatcgacctgattgttgcaatggctccg
tttgtggatgaaccatctatgacccagacatttgaattgattaaaccttttgtggagagc
aaggatgctggcatccagaaaaaagcctatagagtgcttgaggagatgtgtggtggagag
agagcatcttgtaaggcttttgttctggcgaatcttgagcagctgaagggaatgctgcta
gacagcctgacgtctgcggcgtcacctgccaaacggcctagactcaagtgtctgattcac
atagtgaagcagatcaacgaagaacaccatgatttcattactgctctgcttcccgaggtc
attctttgcacaaaggaaatgtctatcggtgcccgcaaaaatgcctactctcttttggtt
gagattggaaatgcatttttgcggttttgtgggaacacaaaagatgccataaatgagttt
ttaggccatgtgtacattggacttactggctctgtaacgatgatcacctgcacagttctt
gccttaaccaggctagtgttccattacaaagattccatagatgtgtcctcattggagcag
ctgctacacaatgtctgtcttctgcttggctgcaggacacgagacattgtcaaggcctct
cttggcttcctaaaagttctcctgttttctctagatgtcaaggttttagccagccatgtt
aatgttattatggaaggtatcagcaatatgaatgatatgcgaagacactttagggtgaaa
ctcaagagtatttataccaaaatgattaggaaatttggatttgagctggtcaaaagcatg
ttgccggccgatcaacacaaggtcctagtaaatatccgtaaaacggaggccagaaataag
agacgcaaactcgtgaccaagaccgaagagggcgactcagacactgaggacgaaacacct
aaagtgaaaggagagagtattgaggacattctggctgagactgattctgctgactcggat
gaagacgagaagcccaagaaggggctaaagaagccaatgaaaaagggccaggcctggtta
aaggaaggtgtgtctgatgaaccactcaacttccttgatccaaaagcagcgcagagagtt
ctggccaccaaccccaacctaaagaaggctaccagagcagagcatggattcaaggtgaca
tccgatggtcggttgatcatcaaagaagaggatgatgatgatgataacaaaactaaagac
gctgaaatggatgatgtactcgaagaggcgggtgtcaaaactagaaagaatccaaaatgg
aaaatgcatgacgattcagatgatgacatgaatgtgaaacctacgatgaaatataaagct
ggtggcattggaatccacaggcctctgggtgcacgaccagagtttgggaaagagtataaa
tctaagaagggaaaaggggatgttaagaaggaaggcaagtgtgacccatatgcttacgtt
cctctgaagaagtcccagctcaatcgcaggaaaaaggccaaactccaaggccagttcaaa
ggcatggtcagaggggccaagaaaggagcgctctctggaacaagaatactgaagaagagg
aaagcctaa
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