Chanodichthys erythropterus (predatory carp): 137020125
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Entry
137020125 CDS
T10334
Symbol
six1a
Name
(RefSeq) homeobox protein six1a isoform X1
KO
K15614
homeobox protein SIX1
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137020125 (six1a)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
137020125 (six1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
137020125
NCBI-ProteinID:
XP_067241445
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Position
5:complement(19951880..19955167)
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AA seq
283 aa
AA seq
DB search
MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSAHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNGVGGKQSQRSPLDGVKSLMSSSEDEFSPPQSPEHNPVLLLHGNMNNP
VAPSYPMPGLGAQHSVHSMQGHPHQIQDSLLGSLTSSLVDLGS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcttgccctctttcggctttacacaggagcaggtcgcgtgcgtctgcgaggtg
ctgcagcagggtgggaacctggagaggctcggacgtttcctttggtccctgccagcctgc
gaccacctccacaagaacgaatccgtgctgaaagcgaaggccgtcgtggccttccacagg
ggaaatttccgtgagctctacaagatcctggaaagccaccagttctccgcgcacaaccac
ccgaagctgcagcagctgtggctgaaggctcactacgtggaggcggaaaaattgcggggt
cgcccgctaggagctgtgggcaaataccgagtacgcagaaaatttcctttgccccgtacg
atctgggacggtgaggagaccagttactgctttaaggagaagtcacggggcgtgctgcgt
gaatggtacacgcacaacccctatccatctccacgggagaagcgggagctggcggaggca
acgggactgaccaccacacaggtcagcaactggtttaaaaacaggaggcaaagagaccgg
gcagccgaggcaaaagagagagaaaacagcgagaacaacggcgttggcggtaagcagagc
cagcggtctccgctcgacggagtcaagtcgctcatgtccagctcggaggatgaattctct
ccgccgcagagccccgagcacaaccccgtgctcctcctgcatgggaacatgaacaatccc
gtggctccctcatacccaatgcccggcctcggtgcacagcattcggtgcacagcatgcaa
ggacatccgcatcagatccaggattcactactgggatctctaacatccagccttgtggat
ttaggatcttag
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