| Entry |
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| Symbol |
tarbp1
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| Name |
(RefSeq) probable methyltransferase TARBP1 isoform X1
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| KO |
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| Organism |
cery Chanodichthys erythropterus (predatory carp)
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| Brite |
Enzymes [BR:cery01000]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
137020246 (tarbp1)
Transfer RNA biogenesis [BR:cery03016]
Eukaryotic type
tRNA modification factors
Methyltransferases
137020246 (tarbp1)
Chromosome and associated proteins [BR:cery03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
137020246 (tarbp1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:34245580..34274071
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| AA seq |
1595 aa
MSNFLIKTLLSRYPDPENLINNLCWPSTSRPDIEKIEALTVLIKELSNKSKEERFISKVQ
SVIWDQCMPLLQMISSADDGGKDLLSAVCGLFAVCVNVCQADDVPGQVIHVLLQVLRTRD
DGNHETDRLDVDVAIEVTAVLLSSISYDGDIISRTLSCTLSCVKDLSDSIISKIIVRIWF
TILKSCNKEAESEVLRQIWDDLLSWHQRDQTESASAQVLLCLTALSDHLYSSETSQNRPD
PRRSQRFFRAIQAGLTHKDSVTRKRALYLLTRCVALAEIKKEDVFNSEEPHTDEILFRWA
PEKQQLLREFWEDFALVLETLEENQIHVIRPVLNRIDMLVETTATDIQGGLFSPSWLLCV
YQRMFHSENKAVMKEGVNHLLELKALHRSAFALAFSQFVIGPLMDVLAESSLYHRAPQQN
IRDCPELGVKLQIFVVNFFSSLPEENRGSVLLQLIQRLGSRQWCAVPLFFLSQALSCLSP
LPLLGSDGLNAFREVLCCTMITHQVLLRGASQCFLLHAALCLTDVTTLSLDEIFGFLVHF
RADESLCRGTALWKELCNWLQTNEGRFRLTDGDLGSSFELLTATLNSKEASIFSYVQQRL
KTFLTVPANTDQTGSLPDPGEAELLARTVLLTADLQQSRSEEPGLELLLQPLLDVLRRLS
TNVYLVLHKTDKSLQLLLRLLQLHSRRSDTEKENEDVVAVALKTHMLSVVDSVQEFLLRR
LSGELRELCDVQRSELYLSVLRELVLSYSTVSWYGSNLQQNYIPKLTTHCLRILNEPSEQ
VQHSTQNPSVSGQVQRVVSMATLALLCNMADEGVLKSQSEAMRSLRSLTNYFYPSASSQH
LNQTLLKPTTATVSHPEDGLLLKDWGRIVAQFIGNQWMCLSFLQKTAGTLQAAEAPEVLR
AAVDALALLPGHLVLPVLDFMASVLPQQVVQCEESLCIEAICASWKVVQALSTNPHDFWS
TLQGFVRLAFNQGLLQLTEEQNPRITACIQQIVSELMELAQVRSGVFNVLIRHCCETWLP
SGAAEGVQSDAVFSTALLHLNILTEACVYGPVFRRDQRLVQEVQSYVEQLGDTCAANTAV
SSDNRDDQYPRVCALAFLCRLNPSNHLHQRLMEELVQRLLRKDAEISKSKVRYYSNSIQH
RVKNRVWQTLLLLLHKLRPEFVSDCVLSHACEAGFCSNQASVKYLIEWALILIVHQNPSH
IQNLWNCFSLDHEKTKTSICTFLSVLVHMNVILPKLQDKEVQWRRAVEVSLQWCFSHNFS
VRLYALLALKRVWELEDARVHTEENLGGLTTVVQACLQQAEAMQNTGNAMKNWSRIQEHF
FFSAFHPIRDYSVETIFQTFPSLSELAEDEWLPLWKFESFVVFPICTALPLKNHASDLGE
LQPGDWIQQDKGDLEQEERWAEVQKKITPWKLSVQEQEPELIAQQRAARLGKLTSSLLVV
ASLIDKPTNLGGLCRTCEIFGAKALVLDSLRHINDKQFQALSVSSELWLPMLEVKPAELS
DYLQLKKREGYWVIGVEQTSNSQSLQDYTFPERSLLLLGNEREGIPANLLQLVDVCVEIP
QHGVTRSLNVHVSAALLVWEYTRQHLGQNPAAPLC |
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| NT seq |
4788 nt +upstreamnt +downstreamnt
atgtctaattttttgataaaaaccctattgtcccgttatcccgatccggagaatttaatc
aataatttgtgctggccaagcacatcacgccccgatatagagaagattgaagctttaact
gttttgatcaaggagctttccaataaatcaaaagaggagcgctttattagtaaggtgcag
tcagttatatgggatcaatgcatgcctctactgcaaatgatctccagtgcagatgatgga
ggtaaggatctgctcagcgctgtctgtggactctttgcggtgtgtgtcaatgtctgtcag
gctgatgatgtacctgggcaggtaattcatgttcttctgcaagtgctgagaacaagagat
gatggtaaccatgaaaccgacaggcttgacgtagatgttgccattgaagtcacagcagtg
ctgttgtctagcatctcatatgatggagacatcatctccaggactctatcctgcaccctt
tcctgtgtcaaagatctttctgactccatcatctcaaaaatcatagtacggatctggttc
accatactcaagtcctgcaataaagaagctgaatcagaggttctgcgtcagatatgggat
gatttgctatcatggcatcagagagatcagacagaatcagcgtcagctcaggttctgttg
tgtctcactgctctctccgaccacctctactcttcggaaacctctcagaaccgaccggac
cctagaagatctcaaaggttttttagggcaattcaggccggattgactcacaaggacagt
gtgacccgcaaacgggctctttacctgctcaccaggtgtgtggcactggcagagatcaag
aaagaagatgtgtttaacagcgaggaacctcacacagatgaaatcctgttcagatgggca
ccagaaaaacagcagttactgagagaattctgggaagattttgctctagtgttagagact
ctagaggagaaccagattcacgtgattcgacctgtactcaacaggattgacatgcttgtt
gagacaacggcaactgatattcaaggtgggctgttttctccatcctggctgctgtgtgtg
tatcagcgcatgtttcacagtgagaacaaggcagtaatgaaagaaggagtcaatcacctg
ttagagctgaaagcactccatcgttctgcgtttgctttggcattctcacagtttgttatc
ggccctctcatggatgttcttgcagagagctccctctatcacagggcaccacagcagaac
atcagagattgtccagaactgggagtgaaactccaaatctttgtggtgaatttcttcagc
agtttgccagaagagaacagaggttcagtgttgctgcagctcattcagcggttgggttca
cggcaatggtgcgcagtccccctgttctttctgtcccaggccctgtcctgtctatctcct
ttacctctactaggatctgatggactcaatgcattcagagaagttctgtgctgtactatg
atcactcaccaggttcttttgagaggagcttcacagtgttttctgctccatgctgctctc
tgcctgacagatgtgacaacgttgtctctagatgagatatttggtttccttgtacatttt
cgagctgatgagtctctatgtcggggtacagcactttggaaagagctgtgtaattggctc
cagactaatgaaggccgttttcgtttgactgatggcgatttaggctcctcttttgagctt
ctcactgcaactttaaacagtaaagaagcttctatattcagctacgtccagcagcgactg
aagaccttcctcacagttccagccaacacagatcagacaggaagtctacctgatccaggt
gaggctgagctgctggcgcggaccgtactgcttacagcagacctgcagcagagcaggagt
gaggaacctggtctagaactgcttctccagcccctactggacgtcttaaggagacttagt
actaacgtctatctggtgctgcacaagacggacaagagcctgcagttactgctgcgctta
ctgcagctgcatagcagacgctcggatacagagaaggagaatgaagatgttgtggctgtc
gctttgaagacgcacatgctgtcagtggtggattcagtgcaggagtttctgctgaggagg
ttgagtggggaactgagggagttatgtgatgtgcagaggtctgaactttatctctcagta
ttaagggagctggttctttcttactccactgtttcgtggtatggttcaaatctgcagcaa
aactacatcccaaaactcaccactcactgcttgaggatcctcaatgaaccttctgaacag
gtgcagcactcaacacagaatccctctgtgtcagggcaggttcagagagtggtcagtatg
gccacacttgcgctgttgtgtaacatggctgatgaaggtgtcctgaagtcccagtctgag
gccatgagatcacttcgctcgctgaccaactatttctacccttcagcatcatctcagcat
ctcaaccagacattactgaagcccacaactgcgacagtcagtcatccagaggatggtctc
ttgctgaaggactggggacgaattgtggcccagtttattggaaatcagtggatgtgtctg
agtttcctgcagaagactgctgggacccttcaggctgctgaagctcctgaggtcctgagg
gctgcggtggatgctttggcattattgcctggccatctcgttctgccggtgctagacttc
atggcatcagtcttaccacagcaggtggtgcagtgtgaagaatctctttgcattgaggcc
atatgtgcctcatggaaggtggttcaggctctgagcacaaaccctcatgacttctggtcc
acactgcagggattcgtgcgcttagcttttaaccaggggcttttgcagctcacggaggaa
cagaaccccagaatcacggcctgcatacaacagattgtgagtgagctcatggagttggct
caggtccgatcaggggtgtttaatgttctgatccggcattgttgtgagacgtggcttcca
tctggggcagcagagggtgttcagtcagacgctgtgttcagtacggctctcctacacctc
aacatcctgactgaggcgtgtgtgtatggcccggtgttcagaagagaccaaaggcttgtt
caggaggttcaaagctatgttgagcagcttggtgatacttgtgcagcaaacacagctgtc
agcagtgataacagagacgatcagtatcctcgagtgtgtgctttggcttttctctgccgc
ttgaatccatctaatcatcttcaccagcgtctgatggaagagctcgtgcaacgactactg
aggaaggatgccgagatctcaaaatccaaagtacgttactatagcaactccatccagcac
agagtgaagaaccgcgtgtggcagacgctgctgctgctactgcataaactcagaccggag
tttgtgtcggactgtgtgttgagtcacgcgtgtgaggccgggttctgcagtaaccaagca
tccgtcaagtacctgatcgaatgggccctgatcctgattgtccatcagaacccgtctcac
atccagaacctgtggaactgtttcagcctggatcatgagaagacaaaaacaagcatttgc
acctttctctccgtcctcgtgcacatgaacgtcatcctcccaaaactgcaagataaggag
gtgcagtggcgtagagcggtggaggtgagcctgcagtggtgtttcagtcataacttcagt
gtccgtctgtatgccctgctcgcccttaagagggtgtgggagctggaggatgcccgtgtc
cacacggaggaaaacctgggcgggctgaccacagttgtccaagcttgtttacaacaggct
gaagccatgcagaacaccggaaatgcaatgaaaaattggtctagaatccaggaacatttc
ttcttcagtgctttccacccaatcagggattacagtgttgagacaatattccagaccttt
cccagcctctcggagttggcagaagatgagtggcttccactgtggaaatttgagagtttt
gttgtcttcccgatatgcaccgccctgccattgaagaatcatgcgagtgatcttggtgaa
ctccagcctggtgactggatccaacaggacaaaggtgatttggagcaggaagagcgctgg
gcagaagttcagaagaaaatcaccccgtggaagctgagtgtccaggagcaggagcctgag
ctcatcgcccagcagagggcagcacgtctgggcaaactcaccagcagcctcctggtggtc
gcatcgctcattgacaagcccaccaatctgggcggtctgtgcaggacatgtgagatcttt
ggggccaaagctctggttctggacagtttgcgacacattaatgataaacagttccaggcg
ctcagtgtgtcttcagagttgtggctgccgatgcttgaggtgaagcctgcagagttgtca
gattacctgcagctgaagaagagagagggatactgggtaataggtgtagagcaaacatcc
aacagccagagtttacaagattacacttttcctgagagaagccttcttttactcggtaat
gaaagggaaggcattcctgcaaacctgctgcagctggtggatgtgtgtgtggagattcct
cagcacggtgtcactcgctccctcaacgtgcacgtgagcgccgccctgctggtgtgggaa
tatacacgccagcatttaggacaaaaccctgcagcccctctgtgctga |
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