Chanodichthys erythropterus (predatory carp): 137020264
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Entry
137020264 CDS
T10334
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
137020264 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cery03021
]
137020264 (polr1b)
Enzymes [BR:
cery01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
137020264 (polr1b)
Transcription machinery [BR:
cery03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
137020264 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
137020264
NCBI-ProteinID:
XP_067241642
LinkDB
All DBs
Position
5:36177532..36194440
Genome browser
AA seq
1132 aa
AA seq
DB search
MDLSKWCNLKPEPSLKHLTEAGFGVPKNKQHVPVQELVKAHIDSFDQAVTDGLCRVVEGI
PPLEFMYKGDRVSLSFVEAIIHPPAIAKGGISRDVRVFPAECRGRRCTYKGKLVADVSWS
INGIPKGIIKQALGQLPIMVKSKLCNLHGLSPKELIQHHEEAEEMGGYFLVNGIEKVIRL
LIMPRRNYPITISRPKFKTRGPGYTQYGVSMHSVRDEHTAVNMNLHYLENGTVMVNFIYQ
KELFFLPLGFALKALVDYSDYQIYQELIKGREDNSFFKSCVSEILRIVMDQGCTTKAKVL
RFLGERFRVKLNLPEWYTHEQCAHFLLDECLCIHLKSDVEKFYMLCMMTRKLFSFAKQEC
MEENPDSLMFHEVLTPGQIYLMFLKERMAGWLVSVKYAMDKRSEKLGALTGDTITKIFNK
ATDLTKAFEYFLATGNLQSKTGLGLLQNTGLCVVADKLNFIRYLSHFRCVHRGASFAKMR
TTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAHSEIVTQVHPTTTLPALLCSLGVTAV
DGTPGQPYSDCYPVILDGAMVGWVEKNVAPSVIESLRRFKVLREKKVPPWTEIVLVPQTG
KASLYPGLYLFTTPCRMVRPVRNLGLGQQELIGTFEQVYLNVGIFEEELEEGVTTHQELF
PHSMLSVVAEFIPYSDHNQSPRNMYQCQMSKQTMGFPLHSYQDRSDNKLYRLQTPQSPLV
RPSMYDHYNMDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTDVIDLA
EKFKGQDDIVFGVKPGDPKVKDKLDVDGLPFIGSVLKYGDPYYSYINSVTGQSHVVFFKY
QESSIVDNIKVCSNDTGTGRFKRVCITARIPRNPTIGDKFASRHGQKGILSRLWPAEDMP
FTESGMSPDILFNPHGFPSRMTIGMLIESMAGKSASLHGLSHDATPFRFSEKKSALEHFG
EMLKASGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTN
QPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCIDCGSLLSPLLEK
PPPHWSATRHRKTICLLCKKSDSIETVAVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatctctccaagtggtgtaatctaaagcccgaaccgagtttaaagcacttgacagag
gcagggttcggtgtcccaaaaaacaaacagcacgtgcccgtgcaggagctggtgaaggcg
cacattgattcgtttgatcaggcagttactgatggattatgtcgggttgtggagggcatt
cctccgttggagttcatgtacaagggagacagagtcagtctgtcttttgtcgaggccatc
attcacccgccagcgattgctaaaggaggaatcagcagagatgtgcgggtgttccctgcc
gagtgcagaggcaggcgctgcacatacaaggggaagctagtggcggatgtgagctggtct
attaatggcattcccaaaggaatcatcaaacaggctctgggacagctgccaatcatggtc
aaatcgaaactatgcaaccttcatggtctctcacccaaagaactcatccagcatcatgaa
gaagctgaggaaatgggtggttattttctggtgaatggcatagagaaggtgattcgtctt
ctgatcatgccaaggaggaactatcccatcaccatatcaagaccaaagtttaagaccaga
ggaccgggctacactcaatatggtgtttcaatgcactctgtaagggatgaacacacagct
gttaatatgaatcttcactacctggaaaatggaacagtgatggtgaattttatataccag
aaagagctgttctttcttcccttgggctttgcactgaaggctctagtggattactcggac
taccaaatctaccaggagctgattaaaggtcgagaggataactctttctttaagagctgt
gtctcagaaattctgcgtattgtcatggaccagggctgcaccactaaagccaaggtgctc
cgtttcctgggcgagcgtttccgggtcaaactcaacctcccagagtggtacactcacgag
cagtgtgctcacttcctgttagatgaatgtctgtgtattcacctgaagtcagatgtggag
aagttctacatgctgtgtatgatgacacggaaactcttcagctttgccaagcaagagtgt
atggaggagaaccctgacagtctgatgttccatgaagttctcacaccaggccagatttac
ctcatgttcctgaaagagagaatggcaggctggctggtgtcagtgaaatatgccatggac
aagagaagtgaaaaactgggagcgttgaccggagatactataaccaaaatcttcaacaag
gctacagatctcactaaagccttcgagtattttttagccacaggaaacctccagtccaag
acaggtctgggcttgctgcagaacaccggactgtgtgtcgtagcggataagctgaacttc
atccgttacctgtctcatttccggtgcgtgcacagaggagccagctttgctaagatgagg
accacatctgtgcgtaagctgttgccagagtcttggggtttcctgtgtccggtacacact
cctgacggagaaccgtgcggccttatgaaccacatgactgcccatagtgagattgtgaca
caggtgcatcccacaaccaccctgcctgccctgctgtgctctctgggtgtgactgctgta
gacggtacccccggtcagccgtattcagactgttatcctgtcatactggacggggccatg
gttggctgggtggaaaaaaatgtggcgccctcagtcatcgaatctctccgcagatttaag
gtgctgagagagaaaaaagtgccgccttggactgagattgttctggttcctcagacgggt
aaagccagcttgtacccaggcctttatctgttcaccacaccctgtcgcatggtgcggccc
gtccggaaccttggcctgggccaacaggagcttattggcacctttgaacaggtgtacctg
aatgtgggcatcttcgaggaagagttagaggagggagtgaccacacatcaagagctattt
cctcacagcatgttgagcgtggtggcagaattcattccttactctgatcacaaccagagc
cccagaaacatgtaccagtgccagatgagtaaacagaccatgggattcccgctgcattcg
taccaggaccgatccgacaataaactgtaccgtctgcagaccccccagagtcctctggtc
agaccctcgatgtacgaccactacaacatggacaattaccctattggcaccaacgcaata
gttgctgtcatttcttacactggctacgatatggaagatgctatgattgtcaataagtcc
tcatgggagcgtggctttgctcatggttctgtttataagactgacgtcatagatctggct
gaaaagttcaaaggtcaagacgacattgtgtttggggtgaagccaggtgaccccaaagta
aaggacaaactggatgtagatggattgccatttatcggctccgtgctgaagtatggagac
ccttactacagctacatcaattccgttaccggccagagtcatgtggtctttttcaagtac
caggagagctccattgtggacaatatcaaggtgtgcagcaatgacaccggcactggccgt
ttcaaacgtgtttgcatcacagcccgcattcccaggaaccccaccatcggagacaagttc
gccagcagacacggtcagaaaggaatcctgagccgtctgtggcctgcggaggacatgccc
ttcaccgagagtggtatgagcccggacatcctgttcaaccctcatggcttcccctctaga
atgaccatcggaatgcttatcgagagcatggctggaaaatctgcgtccctccatggcctg
tctcacgacgccacacccttcaggttctctgagaaaaaatctgcattggagcactttggc
gagatgctgaaagcatcaggatacaacttctatggaacggaacggctgtactccggcatc
agtggcttggagcttgaggcagacatcttcatcggggtggtttactaccagcgcttgcgt
catatggtctctgacaagttccaggtgagaactacgggagcgagagataaagtgaccaat
cagccagtgggagggaggaacatccagggaggaatccggttcggagagatggaacgggat
gctttgctagctcacgggtcatcatttctgcttcacgaccggctgtttaactgctcggac
cgctccgtggcacaagtttgcatagactgcggcagcctgctgtcaccgcttctggaaaag
ccgccgcctcattggtcagctacacggcatcggaaaaccatctgcttgttgtgcaagaag
agcgactcaattgagactgtagccgttccttatgtgttcagatacttcgtagcagagctc
gcagcaatgaacattaaagtcaaattagacgtcaagtaa
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