Chanodichthys erythropterus (predatory carp): 137020385
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Entry
137020385 CDS
T10334
Name
(RefSeq) toll-like receptor 4 isoform X1
KO
K10160
toll-like receptor 4
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04145
Phagosome
cery04217
Necroptosis
cery04620
Toll-like receptor signaling pathway
cery04621
NOD-like receptor signaling pathway
cery05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
137020385
09143 Cell growth and death
04217 Necroptosis
137020385
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
137020385
04621 NOD-like receptor signaling pathway
137020385
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
137020385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137020385
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cery04054
]
137020385
04090 CD molecules [BR:
cery04090
]
137020385
00536 Glycosaminoglycan binding proteins [BR:
cery00536
]
137020385
Membrane trafficking [BR:
cery04131
]
Endocytosis
Phagocytosis
Toll-like receptors
137020385
Pattern recognition receptors [BR:
cery04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
137020385
CD molecules [BR:
cery04090
]
Proteins
137020385
Glycosaminoglycan binding proteins [BR:
cery00536
]
Hyaluronan
Cell surface receptors
137020385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_1
TIR_2
LRR_14
LRR_5
LRR_6
LRR_9
LRR_Zer-1
LRR_NXF1-5
LRR_R13L1-DRL21
LRR_LRWD1
ThsB_TIR
DUF4327
DUF3267
SP_C-Propep
Motif
Other DBs
NCBI-GeneID:
137020385
NCBI-ProteinID:
XP_067241938
LinkDB
All DBs
Position
5:complement(7269867..7272686)
Genome browser
AA seq
818 aa
AA seq
DB search
MSFFTLSAFMIYLFIGAGESCTKINENLHYSCMGRNLISIPPSIPSSVQTLDFSFNVLKH
LQKSAFPVLSFLRVLDLSRCHIKHIENDAFYNVKNLTSLILTGNPLTYFGPGCLNSLHNL
QRLDLVDVGLVSLQLQMNNLTKLQELRVGTNNLQSVSLPPFMSTFKDLSLLDLHANNISI
IKTDHTVVLRKIGRNMTLILSRNPLLYIEPGAFKDVHLGQLDIRSAFLSFAAQKVGLKAL
YGLNVKRLMFGNNRDDYKIFPSESDYLDGLCSIYFHEVYYYIKERPSGQINIFRCMINAT
IVAVKGGLIRGIPYVPFNEIKELYLIHNQLDTVPGRLLSHLHTLEKVVFTRNVATQVETF
IDMPKLRYLDLSSNQITLSSCCTEVLLNTPQIRYLNLSLNPQIGLSFQAFVGLDSLEILD
FHHTKVVSMGYLSVLSNLKYLRYLDVSYSSIIFTNIYCFYGLSSLNVLKMAGNNFRGDVV
RYLFNNLTVLEHLDLSYCRMVEVHSSSFKNLQRLRLLNLRGNSLMAIDFLTHSNLKQLTS
FYVDKNSITSIPLDVLQKLPTNLSEFDLSSNPIDCSCSQTDFVFWIIQNQNILKQAENIF
CQSFSLSSDLRAADFDIDSCVHKKRLIIVLSVCFVILVVVLSVLAYRFQFYIQYCFILLR
GYRSPAQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIHLCLHMRDFQAGKSIASNI
IDEGIMGSRKVIVVVSQHFIDSAWCRFEFELAQSRFMMERNANIIIIILEDVEERKTKKV
FGLHKHLKKNTYLKWSRDPLSNMRFWIRLRRAIIDTKQ
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttcactctaagtgctttcatgatatatttgttcataggtgctggagaatca
tgcacaaaaattaatgagaatctgcattactcatgcatgggaagaaacctcatctccata
ccaccaagtattccttcatctgttcaaactctggattttagttttaatgttttgaaacac
ttacagaaaagtgcattcccagttttgtcttttctgcgagttcttgatctgtcaagatgt
cacatcaagcacattgaaaatgatgctttctacaatgtgaagaatttgacttctttgatt
ctcactggaaaccctcttacatattttggacctggatgcttgaattctttacataatcta
cagagactagatcttgtggatgttggtctcgtgtccttacagcttcaaatgaataaccta
accaagctacaggaacttagagttggaacaaataacctccagtccgtgtctctccctcca
ttcatgagcacctttaaagacttgagtttacttgatctacatgccaataatatatccatc
atcaagactgatcacactgttgtgttgagaaagattggcagaaacatgactttgattctt
tctaggaatccattattatacattgaaccaggagctttcaaagatgttcatctcggacag
ctggatatccgatctgcatttctttcatttgctgctcagaaagttggtctaaaagctcta
tatggtcttaatgtcaaaaggctgatgtttggaaataacagagatgattataagattttc
ccatcagagtcagactatttagatggcctttgttctatttattttcatgaggtatattat
tacataaaagaaaggcctagtgggcaaattaatatctttcgctgtatgattaacgccaca
attgtagctgtgaagggtggtctaattcgtggtattccgtatgtgccatttaatgaaatt
aaggagctttacttgattcacaatcagttagatactgtgccaggtagactactttcacat
cttcatactttagaaaaagtcgtatttacacgcaacgtcgcaacccaagttgaaaccttt
atagacatgcctaagcttcggtacctggatctgagttcaaaccaaattacattatcatca
tgctgcacagaagttttgttgaacacccctcaaatcaggtatctaaatttgagtttgaat
ccacaaatcggtctttcttttcaagcatttgttggacttgattcccttgaaattctagat
ttccatcatacaaaggttgtaagtatggggtacctttcagttttgtctaacttaaagtat
ttgaggtatctggatgtttcttattcaagtatcatctttactaacatatattgcttttat
ggactgagcagtcttaatgttctcaagatggctggcaataattttcggggtgatgtagta
agatatttatttaataatctcacagttctagagcaccttgacttgtcttactgtcgtatg
gtagaggtccactcgagctcttttaaaaatcttcaaaggcttagacttttgaatctcaga
ggaaacagtttaatggctatagattttcttacccactcaaacctgaaacaattaacatca
ttttatgtagataaaaacagcattactagcatcccacttgatgttctccaaaagttgcca
acaaacctttcagagtttgatttgtcctccaaccccatcgattgctcctgttcccagaca
gattttgttttctggattatccaaaatcagaacattttgaagcaagcagaaaatattttt
tgtcaatctttttcactaagctcagatttgagagcagcggactttgacattgacagctgt
gtgcacaagaaaagactcataattgttttatcagtatgttttgttatattagtagtcgtg
ttatcagtcttggcttataggttccagttttatattcagtattgctttattctactgaga
ggctacagatcacctgcacaacaagaatgttcctatgacgcatttgtgattttctccagc
tatgatgaagtctgggtcatgaatgaactgatggagaatctggagaacggtgttccacct
attcatctttgccttcacatgcgggactttcaagcagggaagtccatcgcctccaacatt
atcgatgaaggaataatgggcagccgtaaagtcattgtggttgtgtctcaacacttcatt
gatagcgcctggtgtcgctttgagtttgaattggctcagtcccggtttatgatggaacgc
aatgccaacatcatcatcatcatactggaagatgtggaagagaggaagactaagaaagtg
tttggtcttcataagcatctgaaaaagaacacatacctgaagtggagcagggaccctttg
agtaacatgagattctggatacggctcaggagagctattattgacacaaagcaataa
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