Entry |
|
Symbol |
vcla
|
Name |
(RefSeq) vinculin a isoform X1
|
KO |
|
Organism |
cery Chanodichthys erythropterus (predatory carp)
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Pathway |
cery05100 | Bacterial invasion of epithelial cells |
|
Brite |
Cytoskeleton proteins [BR:cery04812]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
137020550 (vcla)
Exosome [BR:cery04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
137020550 (vcla)
|
SSDB |
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Other DBs |
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LinkDB |
|
Position |
5:complement(15849478..15898951)
|
AA seq |
1137 aa
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTSPVAAVQAAVSNLVRVGKE
TVQTTEDKIMKRDMPPAFIKVENACAKLVEAAQMLRTDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVTSMNTVKELLPVLISAIKIFVTTKCTKSHGVEEALKNRNYTFEKMSAE
INEIIRVLQLTSWDEDAWANKKDTEAMKRALALIESKMGHAKGWLRDPNGLPGDPGEHAL
RQILDEAGKVGELCAGKERREILGTTKTLGQMTDQVSDVRARGQGATPMGMQKAQQVGQG
LDILVGKVENAARKLEALTNAKQAIAKRIDTAQSWLADPNGGPEGEENIRALLAEAKRIA
DLCEDPKERDDILRSISEIAGLTARLVELRKMGKGDTPEARALAKQIGTALQNLQAKTNR
AVANMRPAKAAVTLEGKMEQALRWINNPGVDDHGVGQAAIRGLIAEGRRLANSLPGPYRQ
ELLAKCERVEQLMMQLADLAARGEGESPQARAVAAHLLEAIKDLKAKMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPLEAPNREEVFEERASNFENHASRLGATAEKAAAVGTANKSTVE
GIQAAVKSARDLTPQVTSAARILLKNPGNQAAYEHFETMKNQWIDNIEKMTSLVDEAIDT
KSLLDASEEAIKKDIDKSRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPKF
RELVKAASDELGRTISPMVMAAKAVAGNIQDPGLQKSFLDSGYRILAAVGKVREAFQPQE
PEFPPPPPDLDQLHVNDDQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEMVSEPMM
VAARQLHDEARKWSSKPPQPPQPEVTDEGFEAAEAEVEIDDEDEFTDNEDDFEPELLLMS
SNQPVNQPILAAAQSLHQEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQ
CAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRT
NISEEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ |
NT seq |
3414 nt +upstreamnt +downstreamnt
atgccagttttccataccaagacgatagagagtatcctggagccggtggctcagcagata
tcccacttggttatcatgcacgaggagggcgaagttgatgggaaagcgatcccagatctc
accagcccagtggcggcagtgcaagcggctgtcagcaacctcgtgcgggtggggaaggag
acagtgcagaccacagaagacaagattatgaagagagacatgcctccagccttcattaag
gtagagaatgcttgtgcgaagctagtggaagcagctcagatgctgaggacagacccatac
tctgtcccggcccgtgattacctcatcgatggctcgcggggcatcctctcaggcacttca
gacctgctcctgacctttgatgaggcagaggtgcgtaaaattattcgcgtgtgtaagggc
atcctggagtacctgaccgtcgcagaggttgtggaaaccatggaggacttgatcacttac
actaaaaacctgggaccaggcatgacaaaaatggcaaagatgattgacgaacggcaacag
gagctgacacaccaggagcaccgtgtgatgctggtcacctccatgaacacagtgaaggaa
ctgctgcccgtgctcatatcagcaattaaaatctttgtgacaaccaagtgcactaagagt
catggtgtggaggaggccttgaagaacagaaactacacgtttgagaagatgagcgctgag
atcaacgagataataagagtgctgcaactcacttcttgggatgaggatgcctgggccaac
aaaaaggacactgaggccatgaaaagagcgctggcattaatagagtcaaagatgggtcat
gctaaaggctggctgagggaccctaatggcctaccaggagatccaggagagcatgcgttg
cgtcagatactggatgaagcaggaaaagtgggtgagctttgtgcaggaaaagagagacga
gagatcctgggaacaaccaagaccttgggccagatgacggatcaggtgtcagatgtgcgt
gccagaggtcagggtgccactcctatgggcatgcagaaagctcagcaggtgggccagggt
ttggatattctggtggggaaagtggagaatgctgcccggaagctggaggccctgaccaat
gccaaacaggccatcgccaagagaatcgacacggcccagagctggctagctgatcctaac
ggtggtccggagggggaagagaacatccgtgctcttctggcagaggccaagcgcatcgct
gacttgtgtgaagaccctaaagagagagacgacattctgcgctccatcagtgagatcgca
ggactcactgcgagactggttgaacttcgtaaaatgggtaaaggggatactcctgaggct
agagcgttggccaaacagattggcactgctttgcaaaacttgcaggcaaagactaaccgt
gcggtggccaacatgagacctgccaaggctgctgttaccctagagggcaaaatggagcaa
gctttgcgctggatcaacaaccctggagtggacgatcatggagtaggccaggctgccata
cgagggctgatagcggaaggccgtcgactggcgaactctctaccagggccgtacagacag
gagctgctagcaaagtgtgagcgagtggagcagctgatgatgcagttggcagatctggct
gcgcggggagagggagagagtcctcaggcgcgcgctgtggctgctcatctgctggaggca
attaaagatctgaaagcaaagatgcaggaagcgatgacccaggaagtatctgatgttttc
agcgatacaaccacaccaattaaacttctggctgtagcagcgacagcaccgcttgaggcc
cccaacagagaggaggtgtttgaagaaagggcatctaactttgagaatcatgccagcaga
ttgggtgctacagcggagaaggccgctgctgtgggaacagccaataagagcacagttgaa
ggcatccaggcggctgtgaaatcagccagagatctaacacctcaggtcacttctgctgca
cgcattttgctgaagaaccctggcaaccaggctgcgtacgagcactttgagaccatgaag
aaccaatggattgacaacattgaaaaaatgaccagtcttgtggatgaagccattgacact
aaatccctcttggatgcttcagaggaggccattaagaaagacattgataaaagccgggtg
gcaatggctaacgttcagccccagatgttggttgcaggggctaccagcattgcccggcgg
gctaacagggtacttctggtggccaagcgggaagttgaaaactcagaggacccgaaattc
agagaactagtcaaagctgcttctgatgaacttggtagaaccatctcacccatggttatg
gctgctaaagctgttgcaggaaacatccaggatccaggtttgcaaaagagcttcctggac
tctggctacaggatcttggctgctgttgggaaagtcagggaagccttccagcctcaggag
cctgaatttccacctccacctccagaccttgatcagctgcatgtcaatgatgatcaggct
cctcccaaaccgcccctccctgagggagaggtccctcccccgagacctccgcccccagag
gaaaaagatgaggagttccccgagcagaaagccggcgagatggtgagcgagccgatgatg
gtggcggccaggcaacttcacgacgaggcccgtaaatggtccagcaaacctccccagcct
ccccagcctgaggtgacagacgagggttttgaggccgctgaggcggaggtagaaatagac
gatgaggatgaattcacagacaacgaggatgattttgagccagagctgctcttaatgtct
tccaatcagccagttaaccagcccattctggccgctgcgcagtctttgcaccaggaggct
cgcaagtggtccagtaagggtaatgacatcattggagcagctaagcgcatggccctgctc
atggcagagatgtctcgtctggtgcgtggaggcagtggaaataaacgtgcccttattcag
tgcgccaaggacattgccaaggcctctgatgaggtcacgcggctggctaaagaggtagcc
aagcaatgcaccgacaaacggattcgcacaaacctgttgcaggtttgtgagcgtatccca
acaatcagcactcagctgaagatcctgtccacagtaaaggccactatgctgggacgtaca
aacatcagtgaggaagaatctgagcaggccaccgagatgctcgtgcacaacgcgcagaac
ctcatgcagtccgtgaaggagacggtcagagaagcagaggccgcctccatcaagatccgc
acagatgcggggttcactcttcgctgggtccgaaagaccccctggtaccagtaa |