Chanodichthys erythropterus (predatory carp): 137020628
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Entry
137020628 CDS
T10334
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
137020628 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cery03036
]
137020628 (ercc6)
03400 DNA repair and recombination proteins [BR:
cery03400
]
137020628 (ercc6)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
137020628 (ercc6)
DNA repair and recombination proteins [BR:
cery03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
137020628 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SesA
Motif
Other DBs
NCBI-GeneID:
137020628
NCBI-ProteinID:
XP_067242551
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All DBs
Position
5:19442777..19461228
Genome browser
AA seq
1397 aa
AA seq
DB search
MPVEGNKDQALPPLSSPVSALTPGVQEDNGLSIPGSSKEEPAATCPENVGSQNPRKSQPL
LHINRQEIQSVDHNSQAAELQGLGVDVYDQDVLEQGVLQQVDRAIQEANQAAAKAEAEKE
YESVLDDVRSCTSALKHINKILEQLAPHAASSKDISRKIESVKRQKENKEKQLKKIRAKQ
KRLQAVLDGEDIQKLEAELLIEDDEEPGPSTLGSMLMPAQESEWEELIRTGHMTPFGSRI
PQKQEKKEPRKVMLSENSGFDKYLADQAMLADSRKRPMKKKITKKHSGEITHGKKQKNGS
LSSKDKKLQKRMRKLQRTALRAHPKARPKVEKELSRARRRKGDGEQTSDSEGSEYVPSEE
LMDPEEPDRDDDDDEFWVDKDEEYELKPYKKKNQAKTRKPKKEDESDEYIPSSSEDEDSQ
KGGKVKKCKDDGDIECYRQRIRKWKRQRLREKQAKREAGEEESEESEVEFDEGFKMPGFL
WKKLFKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKLKTRGSKYRY
AGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHDTGSFTSKKEKLIPEIVASHGILIT
SYSYIRIMQDYIQKYDWHYIILDEGHKIRNPSAGVTMACKQFRTPHRFILSGSPMQNNLK
ELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAYKCACVLRDTINPYLL
RRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQTFLDSKEVYQILNGDMHVFSGLIALR
KICNHPDLFTGGPRLLRGIPDEQLTEEEHFGYWKRSGKMIVVESLLRLWFKQGHRVLLFT
QSRQMLEILEVFVRENGFSYLKMDGTTTIASRQPLIAQYNQNKDIFVFLLTTRVGGLGVN
LTGANRVVIYDPDWNPSTDTQARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQFL
TNRVLKDPKQRRFFKSNDIYELFTLSSPDGSQGTETSAIFAGTGSDVQVPKRHKTSRPSQ
VTSRPSQSHSSASFCDQDQDSTSLSGNRNATSVNGLSNTSASGSPNNNLEPHSNADRLTN
GTSKDLSSTNSPQKHREKKKHCEMAEKDMLPSDGHKHKKRKHSEDARFEGCRISHLVKKK
RYKKELKEEEEKNEKKSDDYVLAKLFKKSGIHSVMKHDSIMESSNPDYVLVEAEANRVAK
DALRALKVSRQNCRLPFSKGSMTTTPPPVKRRFGQKKNSLLSQPSGTTAKAGEKCKDADI
IKKSVVKKPGSAAHFSGEGAEEESASLSSSSLLARMRARNHLNQPQRQEDEEERETQSAA
VHATPTEHDELLVDLRNFVAFQAQVDGQASTKEILEYFTPRLTSTQTPVFRELLRNICEF
HRLPGQEGMWKLKADYR
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagaaggtaacaaggaccaggccctgcctcccctgtccagccctgtcagtgcc
cttactcctggagtccaagaagacaatggcctttccatcccaggaagtagtaaggaagag
ccggcagctacatgtcccgagaatgttgggtcacagaatcctagaaaatcgcagccctta
ctccacatcaaccgtcaggagatccaatctgtggaccacaactctcaggctgccgagctg
cagggtttgggagtggatgtgtatgaccaagatgttctcgagcaaggtgtgttacagcag
gtggacagggccattcaggaggccaaccaggctgcggccaaagcagaggccgagaaagaa
tatgagtccgtactggatgatgtcaggtcatgtacaagtgctttgaagcacatcaacaaa
attttagagcagttagcccctcatgctgcctctagcaaggacatcagtcggaaaattgag
tctgtcaaacggcaaaaagagaacaaggagaagcagttaaaaaagattagagccaagcag
aagagactgcaggctgttcttgatggagaggatatccagaagcttgaggcagaattattg
attgaggatgacgaagaaccaggcccatccactctgggcagcatgcttatgccagctcag
gagtccgaatgggaagagctcatccgcacaggtcacatgacccccttcggttcacggatc
cctcagaagcaagagaagaaagagcctcggaaggttatgctcagtgagaactccggattt
gacaagtacctcgctgaccaagccatgttagcggatagcagaaagagacccatgaagaag
aagatcaccaagaagcactcgggagagataacgcatggcaaaaagcaaaagaacggatca
ctctccagcaaggataagaagctccaaaagcggatgcgtaaactccagaggaccgccttg
agggctcaccccaaagccaggcccaaggtggagaaggagctgtcccgagccaggaggagg
aaaggcgatggggaacagacgtcagatagcgagggttcagagtatgtcccgagtgaggag
ctgatggatcctgaggagccagatagagatgatgatgatgatgagttctgggtggataaa
gatgaagaatatgaacttaaaccgtataagaagaagaaccaggccaaaaccaggaaaccc
aaaaaggaggacgagagcgacgagtacattcctagcagctcggaggatgaagactctcag
aaaggcggaaaagtcaagaaatgtaaagatgatggagatatcgagtgttacaggcaaagg
attaggaagtggaaaagacaaagacttcgggaaaaacaggcaaagagagaagcaggagaa
gaggagtcagaggagagtgaagtggagtttgatgaaggatttaaaatgcctggtttcctc
tggaagaaactcttcaagtatcagcagacaggtgtcaggtggatgtgggaactgcactgc
cagcaagcaggaggcattctgggagacgagatgggcctgggcaagacaatacagataatt
gccttcctggcaggcctgagctacagcaagctaaaaacacgtggctccaaatacaggtat
gctggactggggcccacagtcattgtgtgtccggcgacagtcatgcatcagtgggtgaag
gagttccacacatggtggcctcctttccgtgttgctgtcctccacgacacgggctccttc
accagcaaaaaggagaagcttatcccggaaatagttgccagtcacggcatcctcatcact
tcctactcatacatacgcattatgcaagattacatccagaagtacgactggcattacatc
atcctggatgagggccacaagattaggaaccccagcgctggggtgactatggcatgcaag
cagtttcggacaccccatcgttttatcctctcgggctcacccatgcagaacaacctaaaa
gagctgtggtcgctctttgactttgtgtttccagggaagctggggactctgcccgtcttc
atggagcagttctctgtgcccattaccatgggaggatactccaatgcgtctccagttcag
gtccagacagcctataaatgcgcctgtgttcttcgtgacacgattaacccttacctactg
agaagaatgaaggctgatgtgaaagctaacctctctttacctgacaaaaatgaacaggtc
ttgttctgcagattaacggaagatcagcggcaggtttaccagacttttttggactccaaa
gaggtttatcaaattctgaatggagacatgcatgtcttctcaggcctcatagctctgagg
aagatctgcaaccacccggatctgttcacaggcgggccgcgtttgctccgaggcatccct
gatgagcagctgaccgaggaggagcacttcggttactggaaacgctctgggaaaatgatt
gtggtggagtcactgctgcgcctgtggttcaaacagggacaccgcgttttgcttttcacc
caatccaggcagatgctggagatcttggaggtgtttgtgagggagaatggcttctcctat
ctcaaaatggatggcaccactaccattgcgtccagacagcctctcatcgctcagtacaac
cagaacaaggacatcttcgtcttcctcctgacaacaagagttggcggtttgggagtcaat
ctgactggagcaaatcgggttgtaatctacgacccagactggaaccccagcacagacact
caggctcgtgagcgtgcctggagaattgggcagaaacagcaggtgacggtttacaggctg
ctgacagctggaaccattgaggagaagatttaccacagacaaatcttcaaacagtttctc
accaaccgagtgctgaaagatcctaagcagagacggtttttcaagtctaatgacatttat
gaacttttcacgctgagcagtcctgacggctcccagggaacagaaaccagtgcgatattt
gcaggcacagggtcagatgtgcaggttccaaagagacacaagacctctcgtccttctcag
gtgacctcgagaccatcacagtctcattcatctgcatcattttgcgaccaagaccaagat
tccacatctctatcaggaaacagaaacgctacctcagtcaacggtctctcaaacaccagt
gcttctgggtcaccgaacaataaccttgaacctcattccaatgctgaccgtttgacaaac
ggcactagtaaagatctttcttctacaaacagccctcaaaagcacagagagaagaaaaag
cactgtgaaatggcagaaaaggacatgttaccctcagacgggcacaagcataaaaagcgc
aagcactctgaggacgccaggtttgagggctgccgtatttctcacctggtgaagaaaaag
aggtacaagaaagagttaaaggaggaggaggaaaaaaatgagaaaaagagcgatgattat
gttctagccaaactctttaaaaaatcagggatacacagtgtcatgaagcatgactccatc
atggagtcatcgaaccctgactatgtacttgtggaagctgaggccaatagggttgcgaaa
gatgcgctgagagctctgaaggtctccaggcaaaactgcaggctgcctttctcaaaaggg
tctatgacaacaaccccacctccagtaaagagaaggtttggacagaagaaaaactcactt
ctttctcagccatctgggacaacggcaaaagcaggagagaaatgcaaggatgcagatatt
ataaagaagtcagtggtaaagaagccaggatccgctgctcacttcagcggtgaaggagca
gaggaggaatctgcttctctctcctcatcctctctcctcgctagaatgagggccaggaat
cacctcaatcaaccccagagacaagaggatgaggaagagagggagactcagtctgccgcc
gttcatgcgactcctacagaacacgacgagcttctggttgacctgaggaactttgtggcc
ttccaagctcaggtggatggccaggcgagcaccaaggagatcctggagtacttcaccccg
agactcacttccacacaaacaccagtgttcagagaactgctgagaaatatttgtgagttc
cacagacttcctggtcaggaagggatgtggaagcttaaagctgactacaggtaa
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integrated database retrieval system
