Chanodichthys erythropterus (predatory carp): 137020640
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Entry
137020640 CDS
T10334
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137020640 (rtn1a)
03036 Chromosome and associated proteins [BR:
cery03036
]
137020640 (rtn1a)
Membrane trafficking [BR:
cery04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
137020640 (rtn1a)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
137020640 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
137020640
NCBI-ProteinID:
XP_067242585
LinkDB
All DBs
Position
5:complement(19824874..19859554)
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AA seq
819 aa
AA seq
DB search
MSANSSEGPGLDGKWFEEDEEKNGMFGSAGPRFDEMRDDLHAPKQQFHPFEGSGVAMETA
STGDSLSDMFMKSSPGDGDLYTSLLSSKSSSNPFNDGASLFSSEGNRSPPAPTGTDSGIG
MTPGDPSDHQTTLQGSHKTDHYSYMDMGDDLCDFGSVGNVKNKQQPPMSGYGDDEDEEDE
DEDDIQDFKPKIQEKESKESSHDPFDLGRYLEKSPLGSEDTEVKNSQGSAGGQHAFPYVE
DPSDEEMADYRSYRRMETPQSASPVKITVTTESHTATTQPVRVSPQGGMSERESVLSFGQ
QGLPTVTLSEPEDDSAASSANHSPNHSPTGRESPSDVLFQPAGMKSVSSTQDSSSISSQP
NLPAAQDIKSSAKPSSPWDQDLHGSGDESGDSEIEQVAEDSDSPIHDLTSKTPPAKGGFS
QTSNPFEETNYTSATDKASNPFDKPQTNKVSASNPFELSGGTKMGFGQSSNPPLYSLLRE
EREAELDSDLLIESASEESPKREQEYSAPKPPETSSPVTTGITSSKPITTSATSASPFTD
PPASTLRETEKETEKEKEKEKEKEVPVEKPKPQPEDSWSTKPRPAVMGTSTVTPEQHSSQ
EKESKSTSSIVSSTTEKEADLPLLLQSFSRQKVVDLLHWRDLKQSGLVFGSVLLLLFSLT
QFSVVSVIAYLALAVLSATISFRVYKSVLQAVQKTDEGHPFKNYLEVEIALSADQISKYV
DKTQLYINSTLKELRRLFLVQDLVDSIKFAVLMWLLTYVGALFNGLTLLILAVVSMFSVP
VVYEKYQTQIDQYLGLVRTQVNSIMGKIREKVPGAKKKE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaattcgagcgaggggccgggtttggatgggaaatggttcgaggaggatgag
gagaagaacgggatgtttgggagcgcagggccccgtttcgacgagatgcgggacgatttg
cacgcgcccaagcaacaattccatccctttgaaggaagcggcgttgccatggaaactgca
tctacaggtgactctctgtctgacatgtttatgaagtcatcgccaggggacggtgatctg
tacacctctcttctgtcctcaaaatcctcctccaatccgtttaatgatggtgcctctctc
ttctcctctgagggcaaccgttccccacctgctcccactggaaccgactctggaatcggc
atgaccccaggtgacccctcagaccatcagacgaccctgcagggctcacacaagactgac
cattacagctacatggacatgggggacgatctctgtgattttggtagtgtgggcaatgtc
aaaaacaagcagcagcctccaatgtctggctatggagatgacgaagatgaagaggatgaa
gacgaagatgacatccaggacttcaagcctaagattcaagaaaaagaaagtaaggaatcc
agccatgaccccttcgatctgggtcgctatttggagaagagccctcttggatctgaagat
acagaggtgaagaacagtcagggatcagccggcgggcagcacgcgtttccgtacgtggag
gatccttcggacgaagagatggcagattaccgatcgtaccgtaggatggaaacgccacag
agtgccagtcctgtaaagatcaccgtgacaacagagtcccacactgcgacgacccagcca
gtgagagtgtctccacaagggggaatgtctgagagagagagcgtgctcagtttcggtcag
cagggtcttcccactgtaacactgtcagaaccagaggatgacagcgcagcctcgtccgct
aaccactcccctaatcattcccctacaggtcgagagtctccatctgatgtgctgttccag
ccagcaggaatgaagtctgtgagctccacccaagattccagcagcatcagctctcaaccc
aatcttcctgcagcccaggacatcaagagttcagccaaaccctcatccccatgggatcaa
gaccttcatggcagtggagatgagtctggagattcagaaattgagcaagtggctgaagat
tctgattcaccgatacacgacttgacatccaagaccccgcctgcaaaaggcggattcagt
caaacaagcaacccatttgaggagaccaactatacatctgccactgataaagctagtaac
ccatttgacaagccacaaaccaacaaggtcagtgcaagtaacccatttgagctatctggg
ggtaccaagatgggcttcggtcagtctagcaacccgccactttacagtctgttaagagag
gaaagggaggcggagctcgacagcgacctgctaatcgaatcagcttctgaagaaagtccc
aagagggagcaggaatattctgccccaaaacctcctgaaacatcttctcccgtgacaaca
ggcatcacgtcctcgaagcccatcacaacctccgccacctcggcctctcccttcaccgac
cctccagctagcaccctgagagaaacagagaaagaaacagagaaagaaaaagagaaggaa
aaagagaaagaagtgcctgttgagaagcccaagccgcaaccagaggacagctggtccacc
aaacccaggcctgcagtaatgggaacgtctacagtgactccggagcagcactccagtcag
gagaaggagagtaaaagcacaagcagtattgtgagttcaaccacagagaaagaggctgat
ctgcccttgttactccaaagcttcagcagacagaaagtggtagatctgttacattggcgg
gatctgaagcagtctggactggtgtttggcagcgtgttgctgctgctgttctctttaacc
cagttcagtgtggtgagcgttatagcgtatctcgctctggctgtcctctctgccaccatc
agcttccgagtctacaaatcagtcctgcaggcagtgcaaaaaaccgacgagggtcacccc
ttcaagaactatctggaagtggaaatcgctctctctgcagatcagatcagtaagtatgtg
gataagactcagctgtacatcaactccaccctgaaggagctccgcaggctgtttctggtt
caggatctggttgactccattaagtttgcagtgttgatgtggttgttgacgtatgttgga
gctctgtttaatggactgaccctgttgattctggcggttgtttccatgtttagtgtgcca
gtggtttatgaaaagtaccagacacaaattgatcagtacttggggctggtgcgcacccag
gttaactcgataatgggaaagattagagaaaaggttcctggggccaaaaagaaggaataa
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