Chanodichthys erythropterus (predatory carp): 137020649
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Entry
137020649 CDS
T10334
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04137
Mitophagy - animal
cery04140
Autophagy - animal
cery04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137020649 (hif1aa)
04137 Mitophagy - animal
137020649 (hif1aa)
04148 Efferocytosis
137020649 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137020649 (hif1aa)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
137020649 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
NatA_aux_su
PAS_2
Motif
Other DBs
NCBI-GeneID:
137020649
NCBI-ProteinID:
XP_067242604
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Position
5:20046589..20064009
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AA seq
735 aa
AA seq
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MDSVAPGKKRVSSERRKEKSRDAARCRRGKESEVFYELARELPLPHSTTSNLDKASVMRL
ALSYLRLRKLLNTDVLNVETELDSQWNSSYLKALDGFLMVLSADGDIVYLSENVSKCLGL
PQIDLTGHSVFEFTHPCDHEELREMLAHRNGLSKKAKDLHTNRSFLLRMKCTLTSRGRTV
NVKSASWKVLRCSGHIHTADGVAKGVCEEKNVCSTYLVLICESIPHPANIEAPLDSRTFL
SRHTLDMRFTYCDERITELLGFDPVDLLQHSVYEYYHALDSDHMTKTHHNLFVKGQVCTG
QYRLLAKSGGFVWAETQATVIYNSKNSQPQCVVCVNYILSGIEQPKQILSLQQTNNKKIK
QEQEEHQEESLGAEVTMAELKEKGKQRDGKEEEPVGEELNDSLKGEPEALTVVDPVLTLD
ITNTDSAISVLTDIPLYNDVMLPSSSVLLPLSPLSPPCSSLNDDDASTAHLQPDDFRFPQ
SSSSDSSRSQVETSHHFIVDLPVDSELSDQLKPDHVERLFSMDMESKTHFNTQGVGLDLE
MLAPYIPMDDDFQLRTVSPAQSMCSSPGSALELTPSSSRQTAPAIPAAPPVLVSSDTVQQ
NTRSTEQDNSREVIQDSDISSKCQTNPKLLKRKLETIPLSEAIRLGSVLQLVTDFPEKKI
RKSDASSAEGIRHATILLLPSDVASRLLSRSSEGGAITMPLPQLTRYDCEVNAPVTGRQH
LLQGEELLCALDLVI
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggattcagtcgcacctggaaaaaaaagggtgagttcagagcgaaggaaggagaaatcc
cgagacgcagcacgttgtcggagaggaaaagaatcggaggtgttttatgaactggccaga
gaactgcccctcccccacagcaccacctctaacctggataaagcatcagtcatgagactt
gcactcagttacctgcgtctgcgtaaactactgaacacagatgtactgaatgtggagact
gaattggactctcagtggaacagttcatatctgaaagctctggatgggtttctcatggtt
ctttctgctgatggtgacattgtctacctgtcagagaatgtcagcaagtgtctaggccta
cctcagatcgacctaactggacacagtgtgtttgagtttactcatccatgtgatcatgag
gagctcagagaaatgctggcacacaggaatggtctgtccaagaaagcaaaggacttgcac
acaaacagaagttttctattgaggatgaaatgtacactgaccagcagagggcgcactgtc
aatgtcaaatctgcctcctggaaggtgctgcgctgttcgggccatatccacacagcagat
ggtgttgcgaagggtgtgtgtgaggaaaaaaatgtgtgctcaacgtacctggtgcttatc
tgtgagtctattccccacccagcaaacattgaggctcctctggattctagaacgttcctc
agccgccacactttagatatgcgcttcacctactgcgatgagaggatcacagagctgttg
ggttttgatccagtggatctgttgcagcattctgtgtatgaatactatcatgcgctggat
tctgaccacatgaccaaaacgcaccacaacctgtttgtaaagggacaagtgtgtaccgga
cagtaccggctgctggctaaatcaggaggatttgtttgggccgagactcaggccactgtg
atctataacagtaaaaactcccagccacagtgtgtggtctgcgtcaactacatcctcagt
ggaattgaacagcccaaacaaatcctgtcccttcagcaaaccaacaacaaaaaaataaaa
caggaacaggaagaacaccaagaggagtcccttggggctgaagtaaccatggctgagtta
aaagagaagggaaaacagagggatggaaaggaagaagagcctgtgggtgaggagctaaat
gacagcctgaagggggaaccagaggctctgactgtggtagaccctgtcctcacactggat
atcaccaacacagactcagcgatctctgtgctgacagatattcccctctacaacgatgtc
atgttgccctcttcaagtgtactgctacccctctcacccctctcacctccctgttcctcc
ctaaatgatgatgatgcctccacagcccatctacaacctgacgacttccgcttcccacaa
tcttcgtcttctgattcttccagatcccaggtggagactagtcaccattttatagttgat
ctccctgtggattcagaattaagtgaccagctaaaaccagatcacgtggagagactgttt
tccatggatatggagtccaagacacactttaatacacagggagtgggtttggatctggag
atgttagctccatacattcccatggatgatgatttccagctgcggactgtttctccagcc
cagtcgatgtgttccagcccaggttcagcactagaactgaccccctccagcagcaggcaa
actgcccctgctatcccagcagcccctccagtcttggtgtccagtgacaccgttcagcag
aacactagatccacagagcaggacaacagcagagaagttattcaagacagtgatatttct
tctaaatgtcagaccaacccgaagctactcaagaggaaacttgagaccatacctctgtct
gaagcaataaggctggggtctgtgttgcagttggtgactgattttcccgagaaaaagatc
agaaaatcagatgcttcatcagcagaagggattcgtcatgccacgatactgttgctgcca
tctgatgtcgccagtagattgttgagcagatcgtcagagggtggagccataactatgccc
ctcccccagcttacccgttacgactgtgaggtaaatgcgcctgtgactggacggcagcac
ctgttacagggggaggagctactgtgtgccttggacctagttatttaa
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