Chanodichthys erythropterus (predatory carp): 137020670
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Entry
137020670 CDS
T10334
Symbol
brf1a
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit a
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cery03021
]
137020670 (brf1a)
Transcription machinery [BR:
cery03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
137020670 (brf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
137020670
NCBI-ProteinID:
XP_067242646
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Position
5:21226349..21291984
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AA seq
671 aa
AA seq
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MRRCKNCGGTDIDVDQARGDAVCMGCGSVLEDNIIVSEVTFVENSGGGSSAVGQFVAGDS
SGTVPSLGGNFHTGVGRESRAATLQNAKRQINHLGHQLQMNQHCLDTAFNFYKMALCKHL
TRGRKSSHVIAACLYLVCRTEGTPHMLLDLSDILQVNVYVLGKTFLVLARELCINAPAID
PCLYIPRFAQMLEFGEKSHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHEF
RRTIKEVISVVKVCEATLRKRLNEFEDTPTSELTIEEFMRVDLEQECDPPSYTAGLKKQK
LKQIELELAKKVDDIEGEICGYQDEIEVELESCRPRARGFYASCSKEDDVISLASSSVLV
GDDGEDDELRAAASHLCSTVCAEDGGGNEQERDREKSTPIKRPSLALLLGALPTAASLGL
PESITKMAEEKENDVEAENGELDLSGIDEDEIDRYILNEKEVKVKTELWMLQNADYLKEQ
KEKEERIAKEKEEGTYKERKPRKKSARRHEPINASTADEAIEKMLEQKRISTKINYDVLK
DLNKSSLKSPTRHPEEGSAGAKSTPAARQRKPLLTSPSIGKTISSFGKRLQPLVCAQPSK
KLALDQKGSGAPLPIPAAPTQNATVVESGPVAYEDPADEEEEDEEDEHCVSAVQLMGSTD
YGYELDDDDGF
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggtgtaagaattgtggggggacggacattgatgtggaccaggcacggggtgat
gccgtgtgcatgggctgcggctccgtgctggaggacaacatcatcgtttccgaggtaacc
ttcgtggagaacagtggaggaggatcgtccgccgtggggcagtttgtcgctggtgactca
tctggaactgtgccatcattgggaggaaatttccacactggggttgggagggagtccaga
gctgccactctacagaatgctaagcgacagattaaccatcttggtcatcagctacaaatg
aatcagcactgtctggacactgccttcaacttttacaagatggcactctgcaagcatctg
accagaggacgcaaatcatcccatgtcatcgccgcctgcctctacctcgtctgccggaca
gagggaacgcctcatatgctacttgatttgagtgacatcctacaggtgaacgtgtatgtt
ttggggaaaaccttccttgttttagccagggagctgtgcatcaacgcaccagctatcgat
ccgtgtctttatatcccgcgttttgcgcaaatgctggaatttggagagaagagccacgag
gtttcgatgacggcactgcgtctcctgcagaggatgaagagagactggatgcacacggga
cgaagaccttcaggcctctgcggagcagctctcttggttgcagcccgtatgcacgagttc
cgtcgcacaattaaggaagtgatcagcgtggtgaaagtctgtgaggccacactgaggaaa
aggctgaatgaatttgaggacacgcccaccagtgagctgactattgaagagttcatgagg
gtggatctggagcaggagtgcgacccgccctcttacacggctggacttaagaagcaaaag
ctaaaacagattgagctggaacttgcaaagaaggttgatgacattgaaggtgaaatctgt
ggctatcaggatgagattgaagtcgagctggagagctgtaggcccagagccaggggattt
tatgcatcctgctccaaagaagatgatgtgatttccttggcatcatccagtgtccttgtt
ggtgatgatggagaggacgatgagctgagagcagcagcgtctcacctgtgcagtactgta
tgtgcagaggatggaggtggcaatgagcaagagcgagatagagagaaatccactccaatc
aaacggccctcgttagcgttattgcttggagctttgcccactgctgccagtttgggcctg
cccgagtccatcactaaaatggcagaggagaaggagaacgatgtggaggcagaaaatggt
gagctagacctgagcggtattgacgaggacgagatcgatcggtacatcctgaatgagaag
gaagttaaggtgaagactgaactgtggatgcttcaaaatgcagactacctcaaagaacag
aaagaaaaggaagaaagaatagcaaaggaaaaggaggagggtacatataaagagcggaag
cctagaaaaaagtcagcacggaggcatgagcccatcaatgccagcactgcagatgaagcc
attgaaaagatgttggagcagaaacgcatctccactaaaataaactatgatgtcctgaaa
gacttgaacaaatccagcctaaaaagtcccactcgccatcctgaagaaggttccgctgga
gccaaaagcacccccgcggcccgccaacggaaacccctactgacttcacccagtattggc
aaaactatcagcagttttggcaagaggttacagcccctggtgtgtgcgcagccctctaag
aagctggccctcgatcagaaagggtctggtgctccattgcccattcctgctgccccaacc
cagaatgctactgttgtagagagtggaccggtggcgtatgaagaccctgcagatgaagaa
gaggaggatgaggaggatgaacactgtgtcagtgctgtgcagttaatgggcagcactgat
tatggctatgaattagatgatgatgatggcttctga
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