Chanodichthys erythropterus (predatory carp): 137020719
Help
Entry
137020719 CDS
T10334
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03040
Spliceosome
cery05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137020719 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137020719 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cery03041
]
137020719 (srsf5a)
Spliceosome [BR:
cery03041
]
Common components
Common spliceosomal components
SR proteins
137020719 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
DUF4090
OB_RNB
QWRF
Motif
Other DBs
NCBI-GeneID:
137020719
NCBI-ProteinID:
XP_067242741
LinkDB
All DBs
Position
5:complement(23572595..23576697)
Genome browser
AA seq
258 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGRFSPRFGGYRQSRSGGSRYGPPVRTEHRIIVENL
SSRISWQDLKDLMRKVGEVTFVDAHRTNKNEGVVEFASHSDMKNAIEKLDGTDLNGRKLK
LYEDRKRNRSRSRSRSRSSSRSRSPSRSRSPERGSKRSRSRSASRTPEKNTSNRSPSRSP
SPPRKQSRSRSASAESQH
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgcgtgttcatcggccgtctgagcccccatgctcgggaaagagacgtg
gagaagttctttaaaggctacggacgtatcagggagattaacctgaaaaacgggtttggc
tttgtggagtttgacgaccacagggacgcagatgacgcagtgtatgagctgaatggaaaa
gagctgtgcagcgagagggtgactattgagcatgctcgctctcgcagaggaagaggtggt
ggcccaggaatgggaggacgtttctctccacgctttggagggtaccgtcagtcccgcagt
gggggttccaggtatggaccaccagtgcgcacggagcacagaatcattgtggagaatctc
tcctctcgcatcagctggcaggatctgaaggacttgatgaggaaggtgggagaagtgacc
tttgtggatgcacacaggaccaataagaatgagggggtggtggagtttgcttcgcacagt
gatatgaagaatgccatcgagaagctggatggaacagatctgaatgggcgcaagctcaag
ctgtatgaggatcgcaagaggaatcgtagcaggagtcgttcccgcagcaggagcagctcc
cgttcccgttcgcccagtcggagtcgcagccccgagcgtggaagcaagcgttctcgcagc
cgctcagctagtcgcaccccagagaagaacaccagcaaccgctctccttcccgctcgccg
tctcctccgaggaaacagagccgctcccgatctgcttctgcggagagtcagcactga
DBGET
integrated database retrieval system
