Chanodichthys erythropterus (predatory carp): 137020879
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Entry
137020879 CDS
T10334
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137020879 (sox3)
Transcription factors [BR:
cery03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
137020879 (sox3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Pico_P1A
Motif
Other DBs
NCBI-GeneID:
137020879
NCBI-ProteinID:
XP_067243115
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Position
1:complement(9366283..9390927)
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AA seq
521 aa
AA seq
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MISRTWTRTEMLRVKRKSDIKRKEVHYPAEKEANGFHSHHGNRAFSPRQTYNKVDPDLCW
LREAAERSSALLIPAEQPRSVLLLGGQPPGPRQTTEDSDKRLLIDIHAHSLSRFSVICCG
AFQELQQSWLNAMAPSAGRAWLSAAAEWKTAYPSLSRLSSKRHGLRVLTGSLQLNSMQDL
KCREKDLEERLCNGEQIHPQAPNPLSCQQQQVPATVSSNTGRNEIISNPKTHLIIPKSNT
GSAAGGKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLTD
AEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYSLPGGLLAPGANSVNNAVS
VGQRMDYTHMNGWTNSAYSLMQDQLAYSQHPSMNSPQIQQMHRYDMAGLQYPMMSTAQTY
MNAASTYSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAITSHSQRACLGDLRDMISMY
LPPGGDSADHSSLQTSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaaggacgtggacaaggactgagatgctgagagtgaagaggaagagtgacata
aagaggaaagaagttcattacccagctgaaaaggaggcaaatggctttcatagtcaccat
gggaacagggctttctctccccgacaaacctataataaggttgaccctgacctctgttgg
ttaagagaagctgctgagagatcaagtgcattgttgattcctgctgagcagcccagatct
gttcttctgctgggagggcaaccacccgggccacgacaaactactgaggacagtgataaa
cgtctcttaattgacatacacgcacactctctcagtcgtttctctgtcatatgctgtggt
gcttttcaggagctccagcaatcttggctgaatgcgatggctcccagtgcagggagggct
tggctcagcgctgctgcggaatggaagactgcatacccttctctctctcgtctcagctca
aagcggcatggtttgagagtcttaaccggctctctccagctaaacagtatgcaggacctt
aaatgcagagagaaggatttagaagaacgactgtgcaacggtgaacagattcatccccag
gcacccaatccattatcctgtcaacaacagcaggtccctgccacagttagcagcaacact
ggccgtaatgaaatcatcagtaatcccaaaactcatctcatcatacccaagtccaacacg
ggctcggcggcgggcggcaaaaacaacagtgccaacgaccaggaccgggtgaagcggcct
atgaatgctttcatggtgtggtctcgcggtcagcggaggaagatggcacaagagaatcct
aaaatgcacaactctgagatcagcaagcgcctcggtgctgactggaaacttttgactgac
gccgagaagagacccttcattgacgaggccaagcggttacgagccatgcacatgaaggag
cacccggattacaaataccgtccccgcaggaagaccaagaccctgctgaagaaagacaag
tattccttgcccggaggactcttggcgcccggtgccaactctgtcaacaatgccgtctcg
gtgggccagcggatggactacacgcacatgaacggctggacgaacagcgcgtactccctc
atgcaggaccagctggcctactctcagcatcccagcatgaacagcccccagattcagcag
atgcaccggtacgacatggcgggacttcagtacccgatgatgtccacggcccagacctac
atgaacgcggcgtccacgtacagcatgtcaccagcatacacgcagcaaacttccagtgca
atgggtctgggctccatggcttcagtgtgcaagacggaacccagctctcctcctccagcc
ataacctctcactctcagcgtgcttgtttgggagacctgagggatatgataagcatgtac
ctgccgcccggaggagacagcgccgaccactccagtctacagaccagtcggttacacagc
gttcatccgcactatcaaagcgcagggactggcgtgaacggaacgctacccctaacccac
atttga
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