Chanodichthys erythropterus (predatory carp): 137021324
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Entry
137021324 CDS
T10334
Name
(RefSeq) nidogen-1-like isoform X1
KO
K06826
nidogen (entactin)
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137021324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cery04990
]
137021324
Domain-containing proteins not elsewhere classified [BR:
cery04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
137021324
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
G2F
NIDO
EGF_3
Ldl_recept_b
cEGF
Thyroglobulin_1
EGF_CA
FXa_inhibition
EGF
SGL
hEGF
HEV_ORF1
Plasmod_Pvs28
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
137021324
NCBI-ProteinID:
XP_067243707
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Position
6:373549..400277
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AA seq
1205 aa
AA seq
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MVLVCSVGLLALLVSVQCLTREQLFDYGIQFGDQILDSSTDSVKALELQQTLYFFKGKFD
QVYVSTNGFISMAEPSDESEYLGKMPASFGMIAAFLGDLDTTDGAGYVYFRQDKSPDVLQ
RAADHIRQAFPSDEEIEPTHAVIVTWENVLGQGSERGDGFEFARNTFQLVVANMYSASYA
ILLYPEEKMQFGSTLIDDVDVPVEVGFNEGVVQGWFGWSTTQGSYYRVTEDSEESVSALA
LETNSGQPGVWVFEIGTSPLFTSIVPGQVTEVTEVTSEETVVDTPAPEPTSVQTSEPPYE
PLTSRPETLSESSTPDEFQYRYVPPQQPQNPEVLIIDEDELSVNVFSYNYETCSSNKHKC
SAFADCRDYADGYCCHCKPGYYGNGKDCVAEGKPQRMNGKVNGRLYVGNSPSPVEFSNND
LHSYVVANDGRAYIAVSSIPASIGPSLQPLPALGEAIGWAFALEQPNYHNGFSLIGGVFT
RQAEVIFQPGNERLTIKQEFGGIDEHDHLVVSTHLDGRIPEVPREATVQIEPYNEIYQYS
SNLITSSSRRDYTVNMPDGSVRKHSYLWTQSIRFQSCPHEELMSSVPDSQQLSVDQIFVM
YDSGNQLIRFAMSNKIGSIHSGIPEQNPCFTGRHGCDTNAVCRPAQGKDFTCECAAGFTG
DGRVCYDVDECSESPQICGSYSVCINQPGSFRCECLDGFEFASDGRTCVETEHPVDHCQR
GTHDCDAPERARCRYTGASSYVCACLPGFSGDGRTCQDVDECQTARCHSDAICYNTQGSF
TCQCRPGFHGDGFSCTPGSGGEQTACERHRAAALASTSSSFRPRPALGQYVPSCDGYGAY
EPLQCHAGLGQCWCVDASGQEIPGSRTEAGRRPMCIDHNVAPPLIGPTPRPDISPLTPGA
DLLFAQSGRIELLPLDGSRMSADEARTLLHVPGKVVIAVAYDCVEQTVYWSDITQPAISR
AAITGGQTSVLVSRDLGSPEGIAIDHMSRNMYWTDSILDRIEVSRLDGSHRRVLFDNDLI
NPRPIIADPAHGHLYWADWNRDGPKIERSSMDGTDRTVLVQDGLGLPNGLTYDPQSRQLC
WADAGTRRVECMDPFSRLRRKLTEGIQYPFAIVSYGGKLFYTDWRREAVVAMEHQDGMEV
EEFLPQRRSRTYGITITYPQCPAGLNYCSAENGGCSHLCLPRPGGFSCRCPDARDGSCVE
PDQNF
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggttcttgtgtgcagtgttgggcttctggctctgctcgtgtcggtccagtgtctgacc
cgcgagcagctcttcgattatgggattcagttcggcgaccagattttggactcctcgact
gattcggttaaagcgctcgagctgcagcaaacgctctacttcttcaaaggaaagttcgat
caagtttatgtcagcaccaatggcttcatatctatggctgaacccagcgacgagtccgag
tacctggggaagatgccggccagttttggcatgattgcagcgttcctaggagatctggat
actaccgacggtgccggttatgtctatttccgccaggataaaagtcctgatgtgctccag
agagccgcagatcacattaggcaagcatttcccagtgacgaggagatcgaacccactcac
gccgtcatcgtcacctgggagaatgtgctgggtcaaggaagtgaacggggagatggattt
gagtttgcgagaaatactttccagctagttgtagcaaacatgtattcggcatcctacgcc
atcctgctgtatccagaggagaagatgcagttcggttccacgctcatagatgatgtagac
gtgcccgtcgaggtcgggttcaatgaaggcgttgtccagggctggttcggctggtcgaca
actcaaggatcttactaccgcgtcactgaagacagcgaggagtcggtcagcgctctcgca
ctggagacaaactcaggccagcctggcgtttgggtcttcgagatcggcacgtctccgttg
ttcacctccatcgtccccggacaggtcacggaggtcacagaggtcacgtcggaggagact
gtggtcgacacacccgctcctgagccgacgagcgttcagacctcggagcctccgtacgag
ccgctcacgagccgtccagagacgctctcagagtcgtccaccccggacgagtttcagtac
cgttatgtgccgccgcagcagcctcagaaccccgaggtgctgatcatcgatgaagacgag
ctcagcgtcaacgtgttttcttataattacgagacgtgctccagcaacaagcacaagtgc
tctgctttcgccgactgcagagattacgcagacggatactgctgtcactgcaaacctggt
tactatggcaacggcaaggattgcgtcgccgaaggcaaacctcagaggatgaacgggaag
gtgaacggcagactgtacgttgggaattctccgtctcctgtggagttctccaacaatgac
ctgcactcgtatgtggtggccaatgacggccgggcgtacatcgctgtcagcagcatcccg
gccagcatcggaccctccttacagccgctgcctgctctcggagaggccatcggatgggcg
ttcgcactggagcagcccaactatcacaacggcttcagcctcatcggaggggttttcaca
cgccaggccgaggtgatcttccagcccggcaacgagaggctgaccatcaaacaggagttc
ggcggcatcgatgagcacgatcacctggtggtcagcacacatctggacggcaggatcccg
gaggtgccgcgtgaagccacggtccagatcgagccgtacaacgagatttaccagtattcc
agcaacctgatcacgtcgtcctcacggcgggactacacagttaacatgcctgacggcagc
gtccgcaaacacagctacctgtggacgcagagcatccgcttccagagctgcccacacgag
gagctcatgagctcggtgccagacagccaacagctcagcgtcgaccagatcttcgtcatg
tatgactccggcaaccagctgatccgcttcgccatgagcaacaagatcggctccatccac
agtgggatcccagagcaaaacccctgtttcaccgggagacacggctgcgacaccaacgcc
gtctgccgtccggctcaaggcaaagacttcacctgcgaatgcgccgctggattcactgga
gacggacgggtttgttacgatgtggacgagtgctcagaaagccctcagatctgcggctcg
tacagcgtctgcatcaatcagcccggaagcttccgctgcgagtgtctggacgggtttgag
ttcgccagcgacggacggacctgcgtcgaaacggagcatcctgtggatcactgtcagaga
ggaacgcacgactgcgacgctcccgaacgcgccagatgccgttacaccggcgcctcgtcc
tacgtctgcgcgtgtctgccgggcttctccggggacggacggacctgtcaggatgttgac
gagtgccagacggcccgttgccatagtgatgccatctgctacaacacccagggctctttc
acctgtcagtgtcggcccggtttccatggcgacggcttcagctgcacacctggttctggc
ggcgagcagacggcgtgcgagcgacacagagccgcggcgctggcctcgacctcttcctcc
ttccgcccgcgtccggcgctcggtcagtacgtgccctcctgcgacggctatggcgcgtac
gaacccctgcagtgtcacgccggcctcgggcagtgctggtgcgtggacgcgtcgggacag
gagattcccggctccagaaccgaagcgggccgcagacccatgtgcattgatcacaatgtg
gctccgcccctcattggccccacccccaggcctgacatcagccctctgactcccggagca
gacctcttattcgctcagagcggcagaatcgagctcctcccactggacggcagccgcatg
agcgcagacgaggccaggacgcttctgcacgtgcccggtaaagtggtgatcgctgtggcg
tacgactgcgtggaacagaccgtctactggtccgacatcacacaacccgccatcagccgc
gccgccatcacgggcggccaaaccagcgtcctcgtcagcagagatctgggcagtcctgaa
ggaatcgccatcgatcacatgtccagaaacatgtactggaccgactccatcctggaccgc
atcgaggtgtcgcggttagacggcagccaccgccgcgtcctcttcgacaatgacctcatc
aaccctcggcctatcatcgctgaccccgcccacggacacctgtactgggccgactggaac
agagacgggccgaagatcgagcgctccagcatggacgggaccgaccggacggtgctggtg
caggacggcctggggctgcccaacggattgacctatgacccccagagccggcagctgtgc
tgggccgacgcaggcactcgtcgggtggagtgtatggatccgttctctcgtctccgcagg
aaactgaccgaagggatccagtatccgttcgccatagtgtcctacggagggaagctcttc
tacaccgactggagaagggaagcggtggttgctatggagcatcaggatgggatggaggtg
gaagagtttctccctcagagacgttcacgcacatacggcatcaccatcacttacccacaa
tgccctgcaggcctgaactactgctccgctgagaacggcggctgttcgcacctgtgtctc
ccgcggcccggcggattctcctgccgctgtcccgacgccagagacggatcgtgcgtggag
ccggaccagaacttctga
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