Chanodichthys erythropterus (predatory carp): 137021556
Help
Entry
137021556 CDS
T10334
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cery03041
]
137021556 (rbm39a)
Spliceosome [BR:
cery03041
]
Common components
Common spliceosomal components
General mRNP proteins
137021556 (rbm39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_5
RRM_occluded
PRP38_assoc
RSRP
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
137021556
NCBI-ProteinID:
XP_067244256
LinkDB
All DBs
Position
6:complement(13644678..13650542)
Genome browser
AA seq
523 aa
AA seq
DB search
MADDLDIEAMLEAPYKKDDNKSISTNGHEERSKKKKKSKSRSRSRERKRSRSRDRKKSHD
HRRSRSRERKRSRSRERRRSRSRSRERGGRYRAPFSGLKFNGGPRGKTGPPPVIKLSRRR
SRSRSPFKKDKSPIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRI
ISDRNSRRSKGIAYIEFVDATSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNLQK
GSSGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFADAECA
KKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMARLA
EGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNINVPTNQALNLPSQPIATHCFQ
LSNMFNPNSENDPGWEIEIQDDVIEECNKHGGVIHIYVDKKSAEGNVYVKCPTIPAAMAA
VSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLMPSRR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatttggacatcgaagcaatgctagaggctccatataaaaaggatgacaac
aagtccataagtaccaatgggcacgaggagcggagcaagaagaaaaagaagagcaagagt
cgcagcaggagtcgggagaggaaaagaagcaggagtcgcgatcgcaagaagagtcatgac
cacaggaggagccgcagcagagagcggaagcgcagccgcagcagggagagacgccgcagc
cgttccaggagcagggagcgtggcggtcgctacagagctccattttctggcctgaaattt
aacggtggtcccagggggaagactggcccaccacctgtcatcaaactaagccgtagaagg
tctagaagccgcagtcctttcaagaaagacaaaagccctataagacagcctattgataat
ctcaccccagaggaaagggatgcgcgcacagtgttctgcatgcagctggcagctagaatc
cgaccacgagacctggaggaattcttttctgcagtgggaaaagtgcgagatgtgcgaatc
atctctgacagaaactccagaagatccaaaggaattgcttacattgagtttgtagacgcc
acctctgtacctttggcaataggcctatccggtcaaagacttctcggagtaccaatcatt
gtccaggcttcacaggctgagaaaaacagagcagctgcattggccaacaacttacagaag
ggcagttcaggacctatgagactgtatgttggctcattacacttcaacatcacagaagac
atgctcagaggcatctttgaaccatttggaaggattgatagtattcaactgatgatggac
agtgaaaccggacgatctaaaggatatggctttatcacgtttgctgatgccgaatgcgct
aagaaggctctggaacagcttaatggctttgagttggctggcagaccgatgaaagtggga
catgtgacggaacgcactgatgcctccaccgccagctccttcctggacaatgatgagctg
gagaggaccggtattgatctgggaactactggaaggcttcaactcatggccagactggct
gaaggtactggtctgcagatcccacctgctgcacaacaggcccttcagatgagtggctcc
atggtagccatggctgcagctactgctgctatgaaccctggattgagttttaacatcaac
gtgcccacaaaccaagctttgaatctaccatcgcaaccaattgcaacacactgtttccag
ctgtctaacatgttcaatccaaattcagaaaatgatcctggttgggaaatcgaaattcag
gatgatgtcattgaagagtgcaacaaacacggtggagtcatacatatatacgtggacaag
aaatccgctgaaggtaatgtctatgtaaagtgtcccaccattcctgctgccatggctgcg
gtcagtgcgttacatggacgctggtttggaggtaaaatgatcacagcagcttatgtccct
cttcctacataccacaaccttttcccagagtcagtgcaggctacacagcttcttatgccc
agtcgccggtga
DBGET
integrated database retrieval system
