KEGG   Chanodichthys erythropterus (predatory carp): 137021664
Entry
137021664         CDS       T10334                                 
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7
  KO
K10752  histone-binding protein RBBP4
Organism
cery  Chanodichthys erythropterus (predatory carp)
Pathway
cery03082  ATP-dependent chromatin remodeling
cery03083  Polycomb repressive complex
cery04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:cery00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    137021664 (rbb4l)
   03083 Polycomb repressive complex
    137021664 (rbb4l)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    137021664 (rbb4l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cery03036]
    137021664 (rbb4l)
Chromosome and associated proteins [BR:cery03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     137021664 (rbb4l)
  Histone modification proteins
   HAT complexes
    HATB complex
     137021664 (rbb4l)
   HDAC complexes
    Sin3A-HDAC complex
     137021664 (rbb4l)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     137021664 (rbb4l)
    PRC2.2
     137021664 (rbb4l)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     137021664 (rbb4l)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    137021664 (rbb4l)
  Chromatin remodeling factors
   NuRD complex
    137021664 (rbb4l)
   NuRF complex
    137021664 (rbb4l)
   NuRF complex (fruit fly)
    137021664 (rbb4l)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 WD40_RFWD3 ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 137021664
NCBI-ProteinID: XP_067244541
LinkDB
Position
6:21224632..21232584
AA seq 426 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LEGQAS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggcagacaaagaagtgtatgatgatgcagtggaggagagagtaataaatgaggaatac
aagatctggaagaaaaacacaccgttcctatacgatcttgtcatgacacatgcactcgag
tggccgagtttaacagtgcagtggcttcctgatgtgaacaggcccgagggaaaggactat
gcagttcatcggttggtgctgggcacacacacttcagatgagcagaaccacttagtcatc
gccagcgttcagatccctaatgacgacgctcaatttgatgcgtcccactacgacagcgag
aaaggagcagagtttggagggtttggttcggtgagcggaaagatcgagattgagattaag
atcaaccatgaaggagaagtgaatagggccagatacatgccacaaaacccctgcatcatc
gccaccaagacccccacctctgatgtgctggtgtttgactacaccaaacacccatctaaa
ccagaccccagtggagagtgtagtccagacctgagactgcggggacatcagaaggaggga
tacggtttgtcctggaaccccaacctaagtggaaacttacttagtgcatcagacgaccat
acaatctgtctgtgggacatcagtgctgttcctaaggaggggaagatagtagatgccaag
accatcttcacagggcacaccgctgtggtggaggatgtgtcctggcaccttctacatgaa
tcgctgtttggctctgtggctgatgaccagaaactcatgatctgggacacacgatctaat
aacacatcaaagcccagtcactctgtggatgcccacacggccgaagtcaactgcctgtcc
ttcaacccatacagcgagttcattctggccactggctcagctgacaagactgttgcattg
tgggatctgcgtaacctgaagttgaagcttcactcttttgagtcacataaggatgaaatc
ttccaggtccagtggtctccccataacgagaccatcctggcctccagtggcacagacaga
cgcctcaatgtttgggacctgagtaaaattggagaagagcagtctgcggaggacgcagag
gacgggccacctgagctgctgttcattcatggtgggcatacagctaagatctctgatttc
tcctggaacccaaatgaaccatgggtaatctgttctgtgtcagaggacaacattatgcaa
gtatggcagatggctgaaaacatctacaatgatgaagagccagacacccccgcatcagag
ctggagggccaggcgtcataa

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