Chanodichthys erythropterus (predatory carp): 137021730
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Entry
137021730 CDS
T10334
Symbol
abca7
Name
(RefSeq) LOW QUALITY PROTEIN: phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery02010
ABC transporters
cery04148
Efferocytosis
Brite
Transporters [BR:
cery02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
137021730 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
137021730
NCBI-ProteinID:
XP_067244689
LinkDB
All DBs
Position
6:complement(29410163..29454102)
Genome browser
AA seq
2327 aa
AA seq
DB search
MAIGTQLYLLLWKNFTYRRRNKVQLIIELLWPLFLFLILIAVRQSHPPYKQSQCHFPNKA
LPSAGTLSWIQGIICNINNPCFHHPTVGETPGRVSNFDNSILSRLLVDIRTVLTISGNRT
ALSGLQDLSQAIQRLGERPDAWPNIPVGEYLKANESFSSFLRTNTSISSASVDQLLRSRL
NLQVVSLAGGGMRLSDIVCNASLLGRYLTTEKGDSFPELQGALCAVPSDVMQKAEQIFLS
QLDFSKILTRDRLQANAADLRLISRAVSSVTQELASVMDDISSLSSFSELNSEMRLLTPE
NRLALPRESFRAFSRIMCGHPEAGGERIPSFNWYEDQDIKSFLGRNISEETDLENNNSTT
PFCENLIRSLESNPLSRIVWRGIKPLFIGKLLYTPDTPVTRTIMSEVNKTFQDFQILNDV
QEAWQEVGPRIKTFMESSVEIRLLQDLLRRPEVAVVVNLRLENTSWTASRISRFLSTPDP
ETPRKVGAPPTWLDLYQDLSNTFSTLSELTKCFSLNKIEGLATEGELVERALELLEDRQF
WAGIVFLLPDPSSSSLPPHVKYKIRMDIDDVTRTNKIKDKFWDPGPAAEPFSDLRYVWGG
FIYVQDLVERAVTHLLTGKEPNTGIYVQQMPYPCFVDDVFIRVLNRSLPLFMTLAWIYSV
AMIIKGVVYEKEARLKETMRIMGLSSGMLWLSWFVSSYLPFLFSAGLLIAALKWGDILPY
SDPAVVFFFLTAFATATIMLCFLISTFFSRANLAAACGGLIYFTLYLPYVLCVAWREYLT
STHRILASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLRSSPMEGDRYNFTTSIVMLYVDA
VIYALATWYIEAVFPGQYGVPRPWYFIFQLNYWGGVPLEVGLPIPTAPREEPDDRIEAEP
TNLILGVSIRNLVKIYKKGAKLAVNHLNIKFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TAGTIYVKGMDIRTDMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGQMKGMSMEDVKKEI
NSLLEDVGLHHKRHEQTKNLSGGMQRKLSVAIAFIGGSKVVVLDEPTAGVDPYSRRGIWD
LLLKYREGRTIILSTHYMDEADLLGDRIAIISQGKLCCYGTPLFLKARLGTGYYLTLVKR
EMHRTPSSISTSKLPSAAVSKDSESSLSDDTGLGSEENGFDVAALMALAQQYISDAELVE
DIGREAVINLPHAASEDGSLALFLNELDKRQSEFGVVSYGLSDTTLEEIFLRVAEETGVD
ADPEELPASPGHXGAPSEDTDTEAQETEPLSGDGQGGGAPLTGCFHTCQQLRALFTKRLK
YALRSRRGIFAQIVLPAVFVLIALLFSLIVPPFGKYPSLELQPWMYGEQFTFFSNDAPQD
SATRNLLDALLDPPGFGTKCMEPSSDLECLEEAETKFVRPQIPYSMWQLFHKGNWTVEKP
SPDCECSTENNRRMLPDCPEGAGGIPPPQIKQMTGDILQNLTGRNISDYLIKTYPQILKK
SLKTKKWVNEFRYGGFSLGAKSSQAVDEPHHLEESVLAIRRRYNVAENGSLDQLLHRLPD
VLTGLTSQNNVKVWFNNKGWHAMASFVNIMNNGLLRANLPPNVERRGYGITAYNHPLNLT
KEQLTEMALMTTSVDVLVSICVIFAMSFVPASFVLFLIEERVSKSKHLQFVSGVKPILYW
TTNYVWDMLNYTVPATMVVFIFICFQQESYVSEKNLPALVLLLLLYGWSITPLMYPASFI
FSVPSTAYVVLTSINLFIGINGSVATFVLELFVDEHLNEVNRILKKVFLIFPHFCLGRGL
IDMAKNQAMADAFQRLGTKQNLDPLSWDFVGKNLFAMAMEGIVFFIFTVLLQYKFFINFS
RWSGFVLPPLGTEDEDVAKERDRVKNGKTVGDILVLTDLSKVYKAGRKPAVNRLCLGIPR
GECFGLLGVNGAGKTSTFRMLTGDTHVTYGEAFLSNHSVLTEMEKVHQLMGYCPQFDAIS
DLLTGREHLEFYARLRGVPEAHVAKVAQWGVQKLGLSQYAEREAGGYSGGNKRKLSTAIS
LIGAAPVIFLDEPTTGMDPKAKRFLWNCILSVIKQGRSVVLTSHSMEECEALCTRMAIMV
NGRFQCLGSVQHLKNRFGDGYTIILRLSTPSTEPCPVDTYIQNSFPGIQLKERHQNVLHY
QLPSQTCSLARVFEVLSNNYKELGIADYTVSQTTLDQVFVNFAKEQTDDDQLREVTVNGG
SVANRLQRPTDLKLEKFSRSSTPHSLSTPSTDQAAHSEQTPEPPSTSLKTKKSKSNSPSI
SRQQQQMRMEPVGEAANGSHPPEDQTLGRKDPSMLFIVSTKTQESKV
NT seq
6984 nt
NT seq
+upstream
nt +downstream
nt
atggccattggaacacagctctatctgctgctgtggaaaaacttcacgtaccgcaggaga
aacaaggtccaactgattattgaacttctgtggccgctcttcctcttcctcatcctcatt
gctgtccggcaatcacacccgccatataaacagagccagtgtcactttcccaacaaggcc
cttccttcagcaggcacactgtcatggattcagggcatcatctgcaatatcaacaatccc
tgttttcatcaccccactgtaggtgaaacacccggacgagtgagcaacttcgacaactcc
atactctctcgacttttggtcgatatcaggactgtcctgacaatcagtggtaaccggaca
gcactctccggcctacaggacctgtcgcaggcaatccaaagactgggggaaagacctgat
gcctggccaaatattccagttggagagtatctcaaagccaatgaaagcttctcctccttc
ctgcggacaaacaccagcatctcctcagcatctgttgatcagttactgaggtcacgactg
aacctccaagtggtttcattagcaggtggaggaatgcgtttgtctgatatcgtctgtaat
gcttcactcttgggtcgttacctcaccactgagaaaggagattctttccctgaactccag
ggggcgctgtgcgctgtgccctcagatgttatgcagaaggcagagcagatcttcctctca
cagctggacttcagcaagatcctcacgagagacagactgcaggcaaacgcggctgatctc
cggctcatcagtcgggctgtttcctctgtaactcaggaactagcatcagttatggatgat
atctcttctctgtccagtttctcagagctaaactccgaaatgaggttactgacacctgaa
aaccgattagcactgccacgcgagagctttcgtgccttctccagaatcatgtgtggacac
ccagaggcagggggagagagaatcccttcattcaactggtacgaagatcaggacatcaaa
tctttcctgggcagaaacatatcagaggagacagaccttgaaaataacaacagcaccacg
ccattctgtgaaaacttgattcgaagtctggagtccaaccctctctcacggattgtgtgg
cggggcatcaaaccactgttcattggaaagctgctatacacaccagacacaccagtcacc
cgtacaatcatgtcagaggtaaacaaaacgtttcaggacttccagattctaaatgatgtg
caggaggcatggcaggaagtgggtcccagaatcaaaaccttcatggagagcagtgtagaa
attcggcttctgcaggatcttctgagaaggcctgaggtggcggtagttgtgaacctacgt
ctggaaaacacctcttggacggcttctcgcatttcccggttcctctcgacacctgaccca
gaaacacctcgtaaagttggagcaccgcccacttggttagatctgtaccaggatttaagc
aacaccttcagtactctgtcggaactcacaaagtgcttctctttgaataaaattgagggt
ctggccacagagggtgagctggtcgaacgagccctggagctgctggaagatcgtcagttt
tgggctggaattgtcttcctcctcccagacccttcatcatcctccctacctcctcatgtc
aagtacaagatccgcatggacatagacgatgtaacccgcacaaacaagatcaaagacaaa
ttttgggatccaggcccggctgctgaaccattcagtgacctccgctatgtctggggtggt
tttatttatgtgcaggatttagttgagagagctgtgacacatttgctcactggtaaagag
ccaaacacaggcatatatgtgcaacagatgccttacccctgcttcgttgatgatgtgttc
atacgtgtcctgaatcgttctttgcctctgtttatgacattggcgtggatctattctgtg
gctatgatcataaagggtgtggtctacgagaaagaagctcgtctaaaggagacaatgcgt
atcatgggcctgagctctgggatgctgtggctcagctggttcgtcagtagttacctgccc
ttcctattcagcgcaggactccttatcgccgcccttaagtggggagatatcttaccctac
agtgacccggctgttgttttcttcttccttaccgcatttgctacagccaccatcatgctt
tgcttcctcatcagcacattcttctcacgcgctaacctggcagcagcgtgtggaggcctc
atttacttcacgctttacctgccgtatgtgctatgtgtggcctggagggaatatctgacc
agcacgcacagaatcttagcgagcttcctgtctccagtggcctttggttttggctgtgag
tatttctctcagtatgaagagcagggtgtggggatccagtggtttaacttgagatccagc
cccatggagggggaccgctacaacttcaccacctccattgtgatgttgtatgtagatgct
gtcatctatgcactggctacttggtacattgaagctgtatttccaggtcagtatggtgtc
cccagaccgtggtattttatcttccagctgaattactggggtggggttccgttagaggtg
gggttgcccattcctacagcacctagagaggaaccagatgatcggattgaagctgaaccg
acaaacctcattctgggagtttccataaggaacttagtaaagatttataaaaaaggggcc
aagcttgctgtcaatcaccttaacataaagttctatgagggccaaataacctcttttctg
ggtcacaatggagctggcaagacaaccaccatgtccattctaacaggactgtttcctccc
actgctggtacgatatatgtgaagggaatggacattcgcacagatatggacataatccgc
aggactctgggagtttgtccccagcacaacgtcctctttgacatcctgacggtggaagag
catgtgtggttctatggtcaaatgaagggcatgagcatggaggatgtgaagaaagagata
aattcactactggaggatgtgggcttacaccacaaacgacacgagcagactaaaaacctt
tcaggtggcatgcaaaggaaactgtctgttgcaatcgctttcataggtgggtctaaggtt
gtggtcttggatgagcccacagctggtgtggatccctactcccgccgcgggatttgggac
cttctgctcaaataccgtgaaggccgcaccatcattctgtccacacattacatggatgag
gctgatcttctcggtgaccgcattgcaatcatttcccagggaaagctgtgctgctatgga
acgccgcttttcctcaaggcacgtcttggtacaggatactaccttacgctggtcaagaga
gagatgcataggacacccagcagcatcagcactagcaaactcccttcagctgcagtaagc
aaggacagcgaatcctcattaagtgatgacacaggattgggcagtgaagagaatggattt
gatgttgctgctctaatggctcttgctcagcagtacatctctgatgctgagctggtggag
gacattggcagagaggcagttatcaacttgccccatgctgcctcagaggacggcagtctt
gccctcttcctgaacgaactggacaaacggcagagcgagtttggcgtggtcagttacggg
ttgtcagacaccacgttagaagagatctttcttcgtgtggcagaggagacaggcgtagat
gcagaccccgaagagctgccagcatctccaggccacngaggggcgccatctgaggacaca
gacacagaggcccaggagacagaaccgctgagtggggatggtcagggtggcggtgctcct
ctcacaggctgcttccatacatgtcagcagcttcgagcgcttttcaccaaaagactgaag
tacgctcttcgcagtcgcagaggcatttttgcacagattgttcttcctgcagtttttgtc
cttatcgctctactcttcagtctcattgtcccaccctttgggaaatatccatccctggag
ctccagccgtggatgtacggggagcagttcaccttcttcagcaatgatgccccacaggac
tcagccacacggaacctcctggacgccctgctagatccacccgggtttggtactaaatgt
atggagccgagcagtgacctagagtgtttagaggaagctgaaacaaagtttgtccggccc
cagattccttacagcatgtggcagctctttcataaaggcaactggactgtggaaaagcca
tctcctgattgtgaatgcagtactgaaaataaccgcagaatgctgccggactgcccagag
ggagcaggaggaatcccccctcctcagataaaacaaatgacaggtgatatcctgcaaaat
ttgacaggtcgcaacatttctgactacctcatcaaaacgtatccccaaattctgaagaaa
agtttgaagacgaaaaaatgggtaaatgaatttagatatggaggtttctctctgggcgct
aaaagctctcaagctgtggatgaaccacatcacctggaggagtccgttttggctattaga
agacgctacaacgttgcagagaatggctctttagatcagctccttcatagactaccagat
gtccttacaggactcaccagccaaaacaatgtgaaggtctggtttaataataaaggatgg
catgccatggcatcatttgtgaatattatgaacaatggtctccttcgtgccaacttgccg
cctaacgtagaaagacgcggatatggaataacagcctacaatcacccgctcaacctcacg
aaggagcagctgacggagatggccctgatgactacttcagtggacgttctagtgtccata
tgtgttattttcgccatgtcatttgttcctgccagttttgtgctgttccttattgaggaa
cgggtcagtaaatcaaaacatctgcagtttgtcagtggagtaaagcccatcctgtattgg
actaccaattatgtatgggacatgttgaactatacagtaccagccactatggtggtcttc
atcttcatctgcttccagcaggaatcatatgtatctgagaagaatctacctgcactggtg
ctcctgctgttgctgtatggttggtctatcactccactcatgtacccagcctccttcatc
ttctcagtccccagcactgcctatgtggtccttacctccatcaacctcttcattggcatc
aatggcagtgtcgccacattcgtcctggagctatttgtcgatgagcacttgaatgaggtc
aacaggatcttgaagaaggtcttcctgatcttccctcacttctgtctgggtcgaggtctc
attgacatggccaaaaaccaggccatggcagatgcatttcagcggctgggaactaaacag
aatctggaccctttgtcctgggattttgttgggaagaacctgtttgccatggcgatggaa
ggaattgtgttcttcatcttcactgttctcctgcagtataaattctttattaattttagt
cgatggtcaggctttgtgctgcccccactgggcacggaggatgaggatgtggcaaaagag
agagaccgtgtgaagaatggtaaaactgtgggagacattctcgtcctcacagaccttagt
aaggtatacaaggcaggcaggaagccagcagtgaatcggctttgcttgggcattccacgg
ggagagtgttttgggcttcttggtgttaatggggctgggaaaacctcaaccttccgcatg
ctaacaggagacacccatgttacttatggagaagcatttcttagcaaccacagtgttctt
acagaaatggagaaagttcatcagctgatgggctactgtcctcagtttgatgccatcagt
gacctgctgacaggacgtgagcacctggagttttacgctcgcctcagaggagtgccagaa
gctcatgttgcaaaggtggcgcagtggggagttcaaaagcttggtctgagtcagtatgct
gagcgagaggctgggggttacagtggaggaaataagcgcaaactctccactgctatttcc
cttattggagctgcacctgtcatcttcttggatgagcctacgactgggatggacccaaag
gccaagcgcttcctctggaactgcattctcagcgtgatcaaacagggacgatctgttgtt
ctcacctctcacagcatggaagagtgtgaggctctatgcacccgaatggccatcatggtg
aatggcaggttccagtgtcttggctcagtccagcacctgaagaacaggtttggagatggt
tacacaataatccttcgtttgtccaccccgtctacagaaccatgcccggtggacacctac
atccagaactccttccctgggatccagctgaaggagagacatcagaatgttctccattac
cagctgccatcacaaacctgttcgctcgctcgcgtctttgaggttctgtcaaataattat
aaggagctggggatagctgactacacagtgtcacaaactacactggatcaggtgtttgtt
aactttgctaaggagcagacagatgatgatcagctcagggaagtcacggtaaacggtgga
tccgtggccaacagacttcagcggcccacggacctcaaactcgagaaattcagcaggtct
tccacaccacactctctttcaacaccctctacagatcaagctgctcactcagaacaaacc
cctgagcctccatctactagtttaaagaccaaaaagagtaaatcaaacagtccatcaatc
tcaagacagcaacagcagatgcggatggaacctgttggcgaggcagctaatggatcacac
cctcctgaagaccagactcttgggagaaaagatccatccatgttatttattgtcagtacc
aaaacacaggaaagcaaagtgtga
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integrated database retrieval system
