Chanodichthys erythropterus (predatory carp): 137021760
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Entry
137021760 CDS
T10334
Symbol
rab11fip5b
Name
(RefSeq) rab11 family-interacting protein 1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137021760 (rab11fip5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137021760 (rab11fip5b)
Membrane trafficking [BR:
cery04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
137021760 (rab11fip5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
137021760
NCBI-ProteinID:
XP_067244767
LinkDB
All DBs
Position
1:17034020..17048261
Genome browser
AA seq
1352 aa
AA seq
DB search
MPLISLDDDDQRWVPTHVNVTVLRARGLRTKGKQGSRYVYTIIQVGKEKYTTGLVEKAEE
PQWNEECSFELPPGLLEAGGTSAYPPGSSNLVLTVMHRVLIGLDVFLGQIIVPLDKVFQE
GMCPRNEWLKLHSKAGRKEKERGELQVNVQFTRNNMTASMYDLTVTDKPRSAFGKLKDRV
TGRKRGDVESSSAILPGRYAALSGSVGPPFAGDGGPDEPGEEEVVDEHRSKVKDFFKGKL
RKNSDTRSCSSLASDSSMASSAGEPFVPIELSRTPVYSSRVLEPFRMDTEGGIKVMTHKR
AHSDEASKITGVPHPSPAVENLKGQNTALSKSTLCINGSHIYSSEPVSPKSPSTNPAKRS
LLEKCAPLSRSLQNLTRRGEDSQKSDGRRWSIEKGKKEDGEMDGAQSQTQGAATPEGKPV
QAAGPVEVVDKGKKLRKTLFSSGRSDSLPAKPEQSQVSAPLEGRRRGWFGSGDSQNKPRL
GVSPKVESSSDTPCQIPCSPSQPPCSLPLSCTTGSVSPPSGNHTNPFTHSSSTPPSISPS
NPFLTRLQQNPFFEDLIAEEALKSPTAGYCSLNSSLYHYPVGSSPLRNGVPNKMSAIKRD
RPRSMSRQRSLPTIMPETPEANSNINPNHSLSERAGEWDDFEEFATSRLKSPNGTPTRPP
SAPFLSQVPNTNQMMFVNDKAIGLRVDEVDMGISKPWDLPPLPPRRPMRTQVITMDSWLD
RAQELAVQKEACFLSQTDFASLQHVRDGDLKRNSQVLCSDKESHHISSVGHNKMEAELHS
GIKLNQFMVGEATGQDFPTNNSADASPNGFGEDALGSSECENTIPETLCFPSDWETTVAE
SLCSSPQAQPKHDSELSCEVKNSNEQQQKTKTNDIGLLTLSPRDSNNNTDIISEFAFIDS
ESSTSELQPPFEMNKEGKASKDCSHLHSGNGSSLPRCSPGLPEDILCRMTSELEMFSPKN
THNDITSHLSNSQNHNHCSSPFERSCEGLEGQNVNPCEHQNTASTLNCDSQDVADVLLRE
EITVINQTCLSNDNTVTTQIKPEMKDSCVLLTMHDDEELNVHLTDCNLNSEVCFSKDSEV
KGSCSMLNEQISFEDLHARVAPRNSRSPFSTEVRSARIRPRSTTSSPKTVSSANSLPGSH
NPASDLILHDFSPSPTPLAGTNSCLRLDPSLPANPPNEMPSMGSTCSSTAQSHVDAPLSL
SPEETQPANVLLPHEESSPHPVKPLTNTVVQGEKKPESRSVLEKLKSTINPGKSAPPTTA
EDETNQLALMEARAQYQNMTNMELISLLLQQEMDVKKQRAETEVQVALLEKREAELKKMK
VQVRDLEDYIDKLLVRIMEQTPTLLQVRARPK
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttataagcctggacgacgatgatcagagatgggtcccgacgcatgtcaacgtg
accgtccttcgcgcaaggggtctgcggacgaagggcaagcaaggcagccgctatgtttac
actataattcaggttggcaaggagaagtacaccaccggcctggtggagaaggctgaggag
ccgcagtggaacgaggagtgctcgtttgagctgccgcccgggctcctggaggcgggtggg
acgagcgcgtacccgcccgggagcagcaacctggtgctcaccgtgatgcatagagtgctg
atcggactggacgtgtttctcgggcaaattattgttccactcgacaaagttttccaggaa
ggaatgtgtcctagaaatgagtggctcaagctgcactccaaggctggtcgaaaggagaag
gagcggggagagctgcaggtcaacgtccagttcacccgcaacaacatgactgctagtatg
tatgatttgaccgtaacggacaagcctcgttctgcatttgggaaactgaaggaccgcgtc
acaggaagaaagcgaggagacgtggagtcctcctctgccattttgcctggccgctatgcc
gccctatcagggtctgtaggtcctccgtttgccggagatggtggacccgatgagcctggc
gaggaagaggtggtcgatgaacaccggagcaaggtgaaagacttctttaaagggaaactg
cgcaagaattcagacacacgctcctgttcatcattggcttcggacagtagcatggcatcg
tctgctggggaaccgttcgtcccaatagagctgtccagaacgcctgtctacagcagcaga
gtgttggagcccttccgaatggacactgaaggagggataaaagtgatgacccacaagcgt
gcgcacagcgacgaagccagtaagatcacaggtgttcctcatcctagccctgctgtggaa
aacctaaaaggtcagaacacagcgctctccaaatcaaccctctgcatcaacggtagccat
atctactcatccgagcctgtcagccccaagagtccaagcactaacccggccaagcgctcc
ctgctggagaaatgcgcacccctttctcgctctctccagaacctgacccgacgtggcgag
gactcgcagaagagcgacggtagacgctggtccattgaaaagggcaagaaggaggatggg
gagatggatggagctcaaagtcagacccaaggggccgccactccagagggaaagccagtg
caggctgctggacctgtggaagtggtggataaagggaaaaagctgaggaaaactcttttt
tctagtgggaggagtgactctctcccagccaagccggagcagagccaggtttctgctcca
cttgagggcagacgcagaggatggtttggctcaggtgactcccagaacaagccaaggctg
ggagtctctcctaaggtagagagcagctcagacaccccctgtcagatcccttgctccccc
agtcagcccccatgctctcttcccctcagttgcactactggctcggtgtctccccctagt
ggcaatcacaccaacccattcacccactcttcctcaacacccccttccatctctccctcc
aacccgttcctcacacgactacagcaaaaccctttttttgaggatcttatagctgaggaa
gcactgaagtctccaactgctggttactgttctctcaattcaagtctttatcattatcca
gtcggatccagtcccctccgtaatggagtgccaaacaaaatgtctgcaataaagcgggat
agacccaggagtatgtccaggcagaggtctcttccgaccattatgcctgagaccccagaa
gcaaactcaaatattaatccgaaccactctctgtctgagagggctggggaatgggatgat
tttgaggaatttgccaccagccgtctcaaatcaccaaacgggactccaactagacctccg
tcagcaccgtttctttcacaggtaccaaatacaaaccagatgatgtttgtaaatgataaa
gcaattggtttaagagttgatgaagttgatatgggtatttcaaagccatgggatctgcct
cctctaccaccacgtagacccatgaggacccaagtgatcaccatggacagctggttggat
agagcccaggagctggctgtgcagaaagaggcctgctttctctcccagactgactttgcc
tcccttcagcatgtgagagacggagacttgaagaggaactctcaagttttatgttcagat
aaagagtcgcatcacatttcttcagtagggcataacaagatggaagcagagttgcacagt
ggtatcaaactgaaccaattcatggttggggaagcaacagggcaagatttccctacaaac
aacagtgctgatgcttctccgaatggttttggtgaagatgcacttggaagctctgaatgc
gagaacacgatacctgaaacgctgtgttttccatctgattgggaaaccacagtggccgaa
tcactttgcagttcacctcaggcccaacccaaacacgattcagaattgtcctgtgaagta
aagaactcgaatgagcaacaacaaaagactaaaaccaatgacatcggtttgttgaccctc
tccccaagggattcgaacaacaatacagatattatttcagagtttgctttcattgattct
gaaagttcaacgtcggagttgcaaccaccttttgaaatgaataaagaaggtaaagcatcc
aaagattgttcacatttgcactctgggaatggttcctcacttcccaggtgctcaccaggc
ttacctgaggatatattgtgcagaatgacatcagagttggagatgttttcaccaaagaac
acccataatgatatcacatcacatttgtctaactcacaaaaccataaccattgctcatca
ccttttgagagatcttgtgaaggactggaaggacaaaatgtcaacccttgtgaacaccaa
aacactgcttcaactttaaactgtgactctcaggatgtggctgacgttctcctcagagaa
gaaatcactgtgatcaatcaaacatgcttaagcaatgacaacactgtgacaactcaaatc
aaaccagagatgaaggacagttgtgtcttgctcactatgcatgatgatgaggagcttaat
gttcatttaacagactgtaacctaaactctgaagtgtgcttctcaaaggacagtgaggtc
aagggatcttgttcgatgttgaatgaacaaatcagctttgaggacttgcatgctagagta
gctccaagaaactccagaagccccttttcaacagaagtccgatcagcccgcatcagacca
cgctcaaccacaagctcacccaaaactgtctccagtgccaactcgctcccaggctctcat
aaccctgcatcagacctcattttgcatgatttttccccttcacccaccccattagctggt
actaattcctgcctccgccttgacccttcccttccggcaaatcccccaaacgagatgccc
agcatgggttccacatgctcctccacagcccagtcccacgttgatgcaccgctctccctc
tcacctgaggagacacagccagcaaacgtcctcctgccccatgaggagagcagccctcac
ccagtgaagcccttgaccaacacagttgtgcagggagagaaaaaacctgaaagccgctca
gttctggaaaaactcaagtccaccattaaccctggaaaatctgcgccaccaaccactgct
gaggatgagacaaaccagttggctctgatggaggcccgggctcagtatcagaacatgacc
aacatggagctgatatctctgctgcttcagcaggaaatggacgtcaagaagcagcgagct
gaaaccgaggtgcaggtggcgttattggagaaacgtgaggccgaactgaagaagatgaag
gttcaggtcagagacctggaggactacattgacaaactgctggtgcgcatcatggaacag
acgcccaccttgctgcaggtacgcgcaagaccaaaatga
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