Chanodichthys erythropterus (predatory carp): 137022571
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Entry
137022571 CDS
T10334
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137022571 (dhx34)
Enzymes [BR:
cery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137022571 (dhx34)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
137022571 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
zf-C2H2_DHX34
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_16
XAF1_C
ResIII
nSTAND3
Motif
Other DBs
NCBI-GeneID:
137022571
NCBI-ProteinID:
XP_067245068
LinkDB
All DBs
Position
7:complement(5937898..5953191)
Genome browser
AA seq
1148 aa
AA seq
DB search
MSHEKRQSWDWDSSQCRAQLDEVFFRRHDYIQTGSTEHKEFWTFFERFQRFKTKKEMSAP
KSSRQESHEGKSKKKSGSVDLGLPKDYDARYRINISVCSKDIEERLGGSEHKRRRETSGP
GRQEITDCRLALLHFLDFNQKQSFSKLSKLRREQKSLPIFQYRDRIVEMVRTHPVVVVAG
DTGCGKSTQVPQYLMASGFDHIACTQPRRIACISLAKRVSFESLNLYGSKVGYQIRFETS
RTTATKLLFMTEGLLLRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLPLRTDL
RLVLMSATINIKLFSSYFNDAPVLQVPGRLFPIQVIYQPIPPEEQASRSEKLDPRPYLRV
LQGIDQRYPPEERGDLLLFLSGVAEISTIQEACQAYATHTQRWIVLPLHSTLSLAQQDKV
FDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASS
EQRKGRAGRTGPGVCYRLYSESDYDAFASYPVPEIHRVALDSLILQMMSMGLGDPRTFSF
IDPPPASSIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFKLVEPV
LTVAAALSVQSPFLRSAQHNPDCSTARQPLNSNQGDPFTLMNTFNAWVQVKADRGSGSRK
WCRRRGLEEQRLYEVVNLRRQFKELLRSHGLLEDDTGRRTEPQDRVRRRERLTERQKLHQ
LKRDHELQENTKRKVLRLEEGLEGDASSGSDGEGASSSKKRKDGAEQNVDIQEVKFKLRH
NVNELQEAAYASADLSSRQQSLLKLVLCRGLYPQLAMPDEHNANRKDSEQVFHTRNKQGV
VIHPTSVFASDPEVLHVPEHESSEFGADKGQSNRHQLLAFVTLLETNKPYVSNCVRIPAL
QALLLVANSVDTNADCSRVVVDGWLELGLTDGDTALKVISSALTLRGEWERLLQAQLGQG
GPGSSAGLGLSGPKVSRRELEKLCEGLVRFLLYTEVSYSLRRLTGLQSQNLYIGPQQDPD
LSSASVLSSLFPGMKAEPDPIKGGLRVCSYFTYNCLCDSKDLYSECLRTFWSCPHCDLYM
PLTPLERMQHEVTCRPPEEQQPEEELESVNASSSSSSALTRLYHCDICNKDLTLTSTEIL
KHKRQHLS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatgagaagagacagagctgggactgggacagttctcagtgtcgagcccagctg
gacgaggtgtttttccgccggcatgactacatccagacgggcagtactgaacacaaggag
ttctggaccttcttcgagcgcttccagagattcaaaaccaagaaggagatgtcagcaccc
aaatccagcaggcaggaatcacatgagggaaaatccaagaagaagtctggatctgtggat
ctggggcttccaaaggactacgatgccagatacaggataaacatctccgtgtgctccaaa
gacatagaggagcgcctgggaggatctgagcacaagaggcgcagggagacctcgggtccc
ggcaggcaggagatcacagactgccgtcttgcccttctccatttcctcgatttcaaccag
aagcagagcttcagcaagctttccaagttaaggagggagcagaagagcctccccatcttc
cagtaccgagacaggatagtggagatggtgaggactcatcctgtggtggtggtggctgga
gacacggggtgcgggaagtccacacaggttccccagtatctgatggcttcagggttcgac
cacatcgcctgtactcaaccgcgccgcatcgcctgcatctccctggccaagagagtcagc
ttcgagagcctcaacctgtacggctccaaggttgggtaccagatccgctttgagaccagc
cgcaccacagctaccaaactcctgttcatgaccgaaggtctcctgctccggcagatccag
caggacgcttccctgggccagtaccaggtgttgatcgtggacgaggtgcacgagagacac
ctgcactgtgatttcctgctgggagtgctgcgttcccttctgcccctgcgcacagacctg
cggctggtcctcatgtcggccaccatcaacatcaaactcttctccagctacttcaacgac
gcaccagttctgcaggtgccaggcagactcttccccattcaggtgatctaccagcccatt
cctccagaagagcaggcgtcccgctctgagaaactggacccgcggccgtacctgcgtgtg
ctgcagggaattgaccagcggtacccaccggaggagagaggcgacctgctgctgttcctc
agcggagtggccgagatttccaccatccaggaggcctgccaggcgtacgccacacacacg
cagcgttggatcgtcctccctctgcacagcacgctctcactggctcagcaggataaggta
tttgacattgcaccaccaggggtgagaaaatgtatcatttctaccaatattgctgagacc
tcggtcactatagatggagttcgctttgtcgttgattcaggaaaagtgaaagaaatgagt
tttgacccaaaggctaagatgcagagactgcaggagttctggatcagcagggccagctct
gaacagaggaaaggccgcgcaggcagaacagggccgggagtctgttaccgactctactct
gaatctgattacgacgcctttgcctcatatcctgttcctgagatccacagggtggcgttg
gactcacttatcctacagatgatgagcatgggtctgggtgaccctcgcactttttccttc
atagaccctcctcctgcctccagtattcagaccgcagtgacatatctgagagaacagggg
gcgctagatgaacacggggagctcacctcgattggcaggctgctggctcaactgcctgtg
gatgtagtcattgggaaaatgttggttttgggttccgtcttcaaactggtggagccggtg
ctgacggttgccgctgcgctgagtgtccaatctccgtttctgcgcagtgctcagcacaac
cctgactgctccactgctcgccagcccctcaacagcaaccagggtgacccctttacactg
atgaacacctttaatgcctgggtgcaggtgaaagcagacagaggaagtggctccagaaag
tggtgcagaaggagaggactggaggaacagaggctttacgaggtggtcaacctcagacga
cagttcaaagagctgctgcggtctcatggtctgctggaggatgatacgggccgcaggacg
gaaccgcaggaccgagtccggcgcagagagagacttacagagagacagaagctccaccag
ctgaaaagggaccatgagctccaggagaacaccaagaggaaagttctccgcctggaggaa
gggctggagggagacgcttcctctggatctgatggggagggagcgagctcaagcaagaag
agaaaagatggagctgaacagaatgtggacattcaggaagtcaagttcaagttgcgtcac
aatgttaatgagctacaggaagctgcttatgccagtgcagatctgtcgtcgcggcagcag
tctctgctcaaactggtgctgtgccgggggctatacccacagctcgccatgccagatgag
cacaacgcaaaccgcaaagactctgagcaggtgttccacacacgtaacaaacaaggtgtt
gtgatccacccaaccagcgtgtttgccagtgaccctgaggttctgcatgtccccgagcac
gagtccagcgagtttggtgctgataaagggcagagcaataggcatcagttactggctttc
gttactctgctagaaacaaacaagccttatgtctcaaactgtgtgcggatcccagcccta
caggccctgctgctggtggccaactctgtggacactaatgcggactgctcgcgggtggtg
gtggacggctggctggagctgggcttgactgacggagacacggccctgaaggtaatctcc
tctgccctcactctgcggggtgaatgggagaggctgcttcaggctcagctcggacagggc
ggcccgggtagctccgctggactcgggctgagtgggcccaaagtttcccgtagagaactg
gaaaagctctgtgagggacttgtgcggtttctgctgtatactgaggttagttacagtctg
aggcgtctgacagggctgcagtctcagaacctgtacatcggaccccagcaggatccggat
ctgtcttccgcttcagttctcagctctctgttccctggcatgaaggcggagccagatccc
attaaaggaggcctgcgtgtgtgcagctacttcacttacaactgtctctgtgactctaag
gacctgtacagtgaatgtttgcgcactttttggagctgccctcactgtgacctttatatg
cctctgacgcccttggagcgcatgcaacatgaggtcacctgcaggccaccagaggagcag
cagcctgaggaagagcttgaaagtgtaaacgcgtcatcatcatcttcatctgccctgacc
aggctctatcactgtgatatctgtaataaagacctaactctcacctcgactgagatccta
aaacacaagcgccagcacctgtcctga
DBGET
integrated database retrieval system
