Chanodichthys erythropterus (predatory carp): 137022834
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Entry
137022834 CDS
T10334
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cery03009
]
137022834 (ighmbp2)
03012 Translation factors [BR:
cery03012
]
137022834 (ighmbp2)
Enzymes [BR:
cery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
137022834 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
137022834 (ighmbp2)
Ribosome biogenesis [BR:
cery03009
]
Eukaryotic type
Other ribosome biogenesis factors
137022834 (ighmbp2)
Translation factors [BR:
cery03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
137022834 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
Viral_helicase1
DEAD
UvrD-helicase
Helicase_RecD
ResIII
AAA_22
nSTAND3
Flavi_DEAD
PhoH
T2SSE
AAA_16
SRP54
AAA_7
NPHP3_N
AAA_25
AAA
ABC_tran
AAA_31
UvrD_C_2
AAA_33
Motif
Other DBs
NCBI-GeneID:
137022834
NCBI-ProteinID:
XP_067245408
LinkDB
All DBs
Position
7:complement(35077000..35087259)
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AA seq
999 aa
AA seq
DB search
MEVENFVSKTLELLQEEREAELEETRAWQENLSHKNLQHKGVFLMKLQIGSQHTGMYGRR
LVVFEPRKSIGPSVLPSNTFGPGDIIGLYQSEGEPSQLGSGVVTRVTQASLTVAFDDTQD
SINLDRDGLYNLMKLANDVTYRRLSNALKSLNGYSSGPASHLINVLFGYSEPGILSHQNV
LEYSNTGLDTSQKEAVSFAISQKDVAIIHGPPGTGKTTTVVEVILQTVKQEQKILCCAPS
NVAVDNLVERLVKSKVKVLRLGHPARLLESIQKHSLDAVLAHSDNTNIISDIRKDMDKAF
NEMKKTRDKGQRSNLKREIKDLRRELRTREETAITQILKRADVILATNTGASDDGPLKHL
PKDHFDLVVIDECAQALESSCWITLLKARKCILAGDYKQLPPTIKSQSAASKGLSVSLME
RLIKKYGDSVVRMLTTQYRMNSAIMQWASEQMYQGKLIAHPSVEKHLLRDLAGVADVEET
RIPLLLIDTAGCGLNETEDTDEQSKGNQGEVDIVALHIKALSEAGVQVKDIAIIAPYNLQ
VDLLRQKLSHKYTELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVTRA
RRQLTVVCDSQTVRNHDFLKSLVDYMSEHGEVRTGFEYLEDCVAQNYTRDEKDKRVKDKD
TMSAKQKPKNQGKKVEQEHKKSANNKSSGASQSSVQPDQHKTTSSLHSKPKDVDQTQNMR
KEIQEQLLNFLKDPNKTELQFPSTLNSHERLQVHELSEEMGLRHVSQGEGKNRCVTVSRP
KSGAEKPVKEPEQPDVTECTAAKLQEESQKVSSEPAVDLKSLHLERMRREQQKREEKKQQ
KQQSMRLEPDFNASKNQSVKKPKGTFKGNTKIKAGVTAIAAAASADGDFDALIDAVVKAD
SVCSFVKCKASVLTLGQLCLYCNRQYCLSHHIPEVHGCGDKAKAQARMRISKEGVLYAGS
GQKDKSMDPNKKAYLQRKLDSKLKDMASQRKTKAKDKEN
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgaaaacttcgtttcaaagaccctcgagctcctgcaagaagagagagaggct
gaattagaagaaacacgagcatggcaggagaatttgtctcacaagaatctacagcacaaa
ggagtgtttctgatgaaacttcagatcggaagccaacatactggcatgtatggcaggcgt
ctagtagtttttgaacccaggaaaagtataggaccttcagttcttcccagcaataccttt
ggacctggtgatattataggtttgtatcagtcagaaggtgagccatctcaattgggctca
ggtgtggtaacacgtgttacccaggcgtccctgaccgtggcgtttgatgatacgcaggac
agtattaacttggacagagatggactctacaatctaatgaagctggcaaatgatgtgacc
tatagacgactgtcaaatgccttaaagtctttaaatggatacagcagtggtcctgcatct
cacctcatcaatgtcctctttggttactcagaaccagggatattatcacatcaaaatgtt
ttggaatatagcaacactgggttggatacttctcagaaagaggctgtgtccttcgcaata
tctcaaaaagatgttgcaatcatacatggaccaccagggactggcaaaaccactacagtg
gttgaagtaatcctgcagacagtaaaacaagaacaaaagatcctttgctgtgctccttcc
aatgtggctgttgataacttggtggagcgcctggtgaagagcaaggtcaaggttttaaga
ttgggtcacccagcccgtctcctcgagtcgattcagaagcactcgctggatgcagtcctt
gcacacagtgacaacactaacatcatttctgatattcgcaaggatatggacaaagctttt
aatgaaatgaagaagactcgtgacaaaggccaacggagcaatctgaaacgggaaatcaag
gatctgcggcgagagctgaggaccagggaggaaacggctatcactcagatcttgaaaaga
gccgatgttattctggcaactaacactggagcctctgatgatggtcctctcaagcatctt
cctaaagatcattttgacctggtggtgatagatgagtgtgctcaggctcttgagagcagc
tgttggatcactctgctcaaagcacgcaaatgcatactggctggggattacaaacagctg
ccgcccacgatcaaatcacagagtgctgcatctaaaggcctgtctgtcagcttaatggag
aggctaataaagaaatatggagactcagtggttcgaatgctgaccactcagtaccgtatg
aacagtgccatcatgcagtgggcttcagagcagatgtatcagggaaagctgattgcacac
ccttcagtggagaaacacttgcttagagacctggctggtgttgctgacgttgaggaaacc
agaattccccttctgctcattgacactgcaggctgtggcctgaatgagacggaggacacc
gatgagcagtccaaaggcaatcaaggagaagtagacattgtggctcttcatatcaaagct
ctttctgaggctggagttcaagtcaaagacattgcaattattgcaccctataatctccag
gtggatcttttgagacagaaactgtcccataaatatacagagctggagatcaagtctgtt
gatggatttcagggcagagagaaggaggcagtggtgttgtcattggtcagatccaacagg
aagggtgaggttggatttcttgctgaagacagaaggatcaatgtggctgtgactcgtgcc
agacgccagctcacggtggtgtgtgattctcagactgttcgaaaccatgatttcctcaaa
tcccttgtggactatatgtctgaacacggagaagttcgtactggctttgagtacctggaa
gactgtgtggcacagaattacacccgtgatgaaaaggacaaacgggtcaaagataaagac
acaatgtctgcaaaacagaagcccaaaaaccaaggcaagaaagtagagcaagaacacaag
aaaagtgcaaacaataaaagcagtggagcgagtcagtccagtgttcagcccgatcaacat
aaaaccaccagttcactccattctaaacccaaagatgtagatcagacgcaaaatatgaga
aaagagatacaggagcagcttctgaactttctgaaagacccaaacaagacagaactacaa
tttccttccacactaaattcccatgagcgtctacaggtccatgaactctctgaagaaatg
ggattgaggcatgtaagccagggagaagggaaaaaccgttgcgtaactgtgtcccggcct
aaatcaggagcagaaaagcctgtaaaggagcctgaacaaccagatgtgactgaatgtaca
gcagcaaagctacaagaagaatcacaaaaagtctcctcagagccagctgttgatctgaaa
agcctacatttggagcgaatgcgccgggagcagcagaaacgagaggagaaaaaacagcaa
aaacagcagagtatgagactggaaccagatttcaatgctagtaaaaaccagtctgttaag
aaacccaaagggactttcaaaggaaacaccaagataaaagcaggagtcacagctatagct
gcagctgcctcagctgatggcgattttgatgctctcatcgatgctgtggttaaagctgac
agcgtctgtagttttgtaaagtgcaaagccagcgtcctcacactagggcagctctgcctc
tactgtaacagacaatactgtctgagtcaccatatacctgaggttcacggttgtggagac
aaagcaaaagctcaggctagaatgaggataagtaaagaaggcgtgctctacgcaggaagt
gggcagaaggacaaatcaatggatccgaataaaaaagcatatctgcagagaaaactagac
tctaaacttaaagatatggcatctcaaagaaaaactaaagccaaagacaaagagaactga
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