Chanodichthys erythropterus (predatory carp): 137023060
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Entry
137023060 CDS
T10334
Symbol
irf2bp1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137023060 (irf2bp1)
04121 Ubiquitin system [BR:
cery04121
]
137023060 (irf2bp1)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
137023060 (irf2bp1)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Atypical E3
137023060 (irf2bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
GnRH
RING_XB3-XBAT31
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
137023060
NCBI-ProteinID:
XP_067245745
LinkDB
All DBs
Position
7:4491302..4495985
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AA seq
613 aa
AA seq
DB search
MSSSSQASSRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGADRIELLIDTARQLKRT
HVMQDGRSPGPQPGGKHGPAGKEGPMEAGRPPSERYERGRGEYGSSRLPNGLPRLEDGGP
PEVSRQSPTARRTLVGAVPPNLMAQGLVGAPHGLLTAMPGLNARAGGAPLTISAPMLNEI
SKRQALGMGMNVGVASFMSPEFEKELKEKQRNAEALTELSESVRNRADDWAGRPKHMREA
LHTLSGCTPFNVRFKKDHGLVGRVFAFDAKLMVECELKVFVEYPCGSGNVFSSVLALVKQ
MFHDSQKDTGKVINSGFKYVEYEKRHGTGDWRLLSELLSDAVRAFKDAPAPDALPQPYLD
ASCSMLPTALCHIGRPTQPRVRRRKASPEPEGAERMTSEEMRQHWSLGVYPGIPGHMPAT
SLASAGQPPEAHSSDPSPITALMSVADNVGTATPKDAPGGSGSHSANAGRQNSTSPSPGG
QRRLASRNGEPSAGSSSGGPTTTVTVPLSDQGAVMGAEGSGGAGGGGAPLCCTICHERLE
DTHFVQCPSVPGHKFCFPCTRDFIRRQGSGSEVYCPSGEKCPLVGSNVPWAFMQGEISTI
LAGDVKVKKERDP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcgcaggcatcttccaggcggcaatggtgctacctttgcgacctgcca
aagatgccttgggccatgatttgggacttcagcgaggccgtgtgcagaggctgtgtgaac
tacgagggcgcggaccgaatagagttgctcatagacacggcgcggcagctcaagcgaaca
cacgtgatgcaggacggcagatctccgggtccgcagcccggcggtaaacacggtcccgct
ggtaaggagggtcctatggaggccggcagaccgccctccgagcgatatgagcggggaagg
ggagagtatgggtccagcaggctgcccaacgggctgcccagactggaagatggaggtccg
cctgaggtgagtaggcagagtcctactgccaggaggactttggtgggggctgtgccaccc
aatttaatggcgcaggggcttgtcggagcccctcatggtctgctgaccgccatgcctggt
ctgaatgcccgagccggaggcgccccgttgaccatttctgctcccatgctgaacgagatc
agtaaaagacaggccctgggcatggggatgaacgtgggtgtggcttctttcatgagccct
gagtttgaaaaggagctcaaggagaagcagaggaacgctgaagcgctcaccgagctctct
gaaagcgtaaggaaccgcgccgacgactgggcgggacggcccaaacacatgcgcgaggcc
ctgcacaccctctctggctgcaccccgttcaatgtccgctttaagaaggaccacggcctg
gtggggagggtgttcgccttcgacgccaagctgatggttgagtgtgagctgaaggtcttc
gtcgagtacccgtgcgggtctggtaacgtgttctccagcgtgttggcgctagttaaacag
atgttccacgactctcagaaagacactggcaaggtcatcaactcgggcttcaaatacgtc
gagtacgagaaaaggcacggcaccggcgactggcgtctcctgtcggagcttctcagcgac
gcagtgcgagcgttcaaagacgcgccggccccggatgccctcccacagccgtacctggat
gccagctgctccatgttgcccaccgcgctctgccacatcggccgtcccacgcagcccagg
gtacgcagacgcaaagcctcgcccgagccggaaggcgccgagaggatgacctcagaggaa
atgcgccagcactggtccctgggcgtctaccctggcattcccggccatatgcccgccacc
tcgctagccagcgcaggacagcctccggaggcccacagtagcgacccttcgcccatcact
gcgctcatgagcgtggcggacaacgtcggcaccgccaccccgaaagatgctcccggcggc
agcggaagccactcggcgaacgcgggccgtcagaacagcaccagtccttcgcccggcggt
cagcggcggctggcctcgcgcaacggagaaccgtcggctggcagtagctcgggagggccg
accacgaccgtcaccgtgcccctctctgaccagggcgccgttatgggagccgaaggctca
ggaggagccggaggcggcggcgcccctctctgctgcaccatctgccacgagcgcctggag
gacacacacttcgtccagtgtccatctgtgcccgggcacaagttctgcttcccttgcacc
cgagacttcatccgcagacagggctcgggaagtgaggtgtactgtcccagcggggagaag
tgccccctcgtgggctccaacgtgccgtgggccttcatgcaaggcgagatctccacaatc
ctggcaggtgatgtgaaggtgaagaaggaaagagacccctaa
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