Chanodichthys erythropterus (predatory carp): 137023151
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Entry
137023151 CDS
T10334
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137023151 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137023151 (dhx36)
03012 Translation factors [BR:
cery03012
]
137023151 (dhx36)
Enzymes [BR:
cery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137023151 (dhx36)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
137023151 (dhx36)
Translation factors [BR:
cery03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
137023151 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
AAA_14
NPHP3_N
NB-ARC
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
137023151
NCBI-ProteinID:
XP_067245956
LinkDB
All DBs
Position
7:complement(19201071..19265987)
Genome browser
AA seq
1025 aa
AA seq
DB search
MSHGYGNRRGRRGGGRRFGDGGSRWDGGAGSSGGLGYPRSSDWDSREEQGHGRGRKGGGG
GGGGGGRGKHPPHLKGREIGLWYAKWGGIKRSEAERKSRAVVQMDESREQHITQLLNSVQ
RDPGRASHPSTSQSWRVKDEPSGHSYFDGDDPPEPQNIVKVPKIEPKEEKREDELVANVK
EDLNDTDLEYLFQDVVRTPSLDEELKKDQEKKKDNARYIDMLKFRQKLPSYGMREELVKL
ISANQVLVISGETGCGKTTQVTQFILDDFIQRGMGSLCRVVCTQPRRISAISVAERVAAE
RAEPVGEGKSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSDPYLSSVSHLILDEIHER
SLQSDVLLTIVKDLLIAREDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTYPVKEFLLE
DVVELLRFQPQQQDRRPRYRRGFMHGQNTRPEKEQKEAEYRESWPCYTRTLRDRYSDSTI
DTLEMMDDDEKINLELIVGLIRHIVMKEDEGAILVFLPGWDNISTLNDLLVADQMFKSER
FIIIPLHSLMPTVSQTQVFKKPSPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFD
TQNNIRTMTAEWVSLANAKQRKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEE
LCLQIKILKLGPIACFLRKTMDPPSDKAIELAITHLVDLNALDRNEELTPLGFHLARMPV
EPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADHRRKILSQNSRSDHLT
IVNAFWGWEDAKRQGGRFEREYCWENFLSANTLQMLQNMKGQFAEHLLAAGFVNSKDPKD
PSSNINSENEKLIKAVIVAGLYPKVAKIRPSHSKKRPMPGKVYTKADGKVCIHPKSVNAE
ETQFHYTWLIYHLKMKTTSIFLYDCTEVSPFSLLFFGGDISIQRDQDQETIAVDEWIVFQ
SPARIAHLVKELRKELDVLLEEKIKSPCPVDWNNRESKDCAVISAIIDLITTQETPAQDN
RRGSQ
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgggtatggaaatagacgcggtcggagaggagggggtcggcggttcggagac
ggagggtccaggtgggatggaggagctggatccagtgggggtctaggataccctaggagc
tctgactgggactcaagggaagagcaaggacatggaaggggacgaaaaggaggaggagga
ggaggaggaggaggaggaagaggaaaacatccaccccatttgaagggtcgagaaatagga
ctgtggtatgccaaatggggcggcattaaaagatctgaggcagagaggaaatctagggct
gttgttcagatggatgagtcacgagagcagcacattactcagttgctgaattctgtccag
agagatccgggcagagcctcgcatccctccacatctcagagctggagagtgaaggatgag
cccagcggccacagttactttgacggagatgatcctccagaacctcagaacattgtgaaa
gtgccaaaaattgagcctaaagaggagaaacgggaagatgagctggtagcaaatgtgaaa
gaggaccttaatgatactgacctggaatacttattccaggatgttgtgcggacaccctcc
ctggatgaggagctcaagaaagatcaggagaagaaaaaagataacgctagatacattgat
atgctgaaattcagacagaagctcccttcctatggtatgagagaggagctcgttaaactg
atcagtgctaatcaggtactggtaatcagtggagagacaggctgtggtaagaccacccag
gtcactcaattcatccttgatgacttcatccagaggggcatgggctctctctgcagggtg
gtttgcacacagccaaggcgtatcagtgccatatctgttgcagagagagtggctgcagaa
agggcagagccggtgggagaagggaagtcctgtgggtatcagatccgtctgcagagtcgg
ttaccacggaaacaaggctcagtgttgtattgtacaacgggcattattcttcagtggctc
cgctcagatccatatctctctagtgtaagtcatctgatcctggatgaaattcatgagagg
agtcttcagtctgacgttcttctcaccatcgtgaaagacctgttaattgctcgagaggac
ctaaaagtagtcctcatgagtgcaacacttaacgcagaaaaattcagcaagtatttcaat
aattgtcccatgatccatattcctggatacacatacccagtaaaagagtttttactagag
gatgtggtggaattgcttagattccagccacagcaacaggaccgaagacctcgctataga
agagggtttatgcacggccagaacacacggccagagaaagagcagaaagaggccgaatac
cgtgagagctggccctgttacacccgtacgctcagagatcggtactcagacagcaccatt
gacacgctggagatgatggatgatgatgagaagatcaatctggagcttatcgtaggattg
atccgacacattgtgatgaaagaggatgaaggagcaattctagtgtttctgcctggatgg
gacaacatcagcaccctaaatgatttgctcgtggctgaccagatgtttaagtcagaacgg
tttatcatcatcccccttcactctttgatgcccacggtctctcagactcaggtgttcaaa
aagccgtccccgggagtgcgcaagattgtgatcgcaaccaacattgcagaaaccagtatt
acgatagatgatgttgtgtatgtgatcgatggagggaagattaaagaaactcattttgac
acccagaacaatatcaggaccatgacagcagagtgggtgagcttagccaacgccaaacag
aggaagggccgtgctggcagagtgtctccagggaaatgttatcacctgtataatggactg
agggccagcctcctggataactaccagttacctgagatccaacgcactccactggaagag
ctttgtttgcaaataaagatactgaagttgggccccattgcatgtttcctgcggaaaact
atggaccccccatcagacaaagcaatagagctggccatcacacacctggtggatctgaac
gccctggaccggaatgaagagctgactccattaggatttcatctagcccgtatgcctgta
gagcctcacattggaaaaatgattcttttcggggctcttctgggctgtttggaccctgtg
cttaccatcgcggccagtcttagctttaaagatcctttcttcataccactgggaaaggag
aagatcgcagaccacaggagaaaaatactttcccaaaactctagaagtgatcatctcact
attgtcaatgcattttggggctgggaagatgctaagagacagggcggcagatttgagagg
gaatactgctgggaaaacttcttgtctgccaacacgctgcagatgcttcagaatatgaag
ggtcagtttgcagagcatcttttggcagctggctttgtgaatagtaaagaccctaaagat
cccagctctaacatcaactcagagaatgagaagctgattaaggcagtgatagttgcggga
ctgtacccaaaagtggccaagattcgccctagccatagtaagaagagaccaatgccaggg
aaagtgtacactaaggctgatgggaaagtttgtatccatcctaaatctgtcaatgcagag
gaaactcagttccattacacatggctcatctatcacctgaagatgaagaccaccagtatc
ttcctctacgactgtaccgaggtgtctccattttcattgctgttcttcggaggggacatt
tccatccagagggaccaggaccaagagaccatcgctgtggatgagtggattgtatttcag
tccccggcgcgcattgctcaccttgtcaaagagctgaggaaggagctggacgtgctactg
gaggagaagataaaaagtccatgccctgtggactggaataaccgggagtctaaagattgt
gctgtcatctctgccataatcgacctcatcaccacacaggaaactcctgctcaagacaac
aggagaggcagccagtga
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