Chanodichthys erythropterus (predatory carp): 137023168
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Entry
137023168 CDS
T10334
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cery04121
]
137023168 (rlim)
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137023168 (rlim)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137023168 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
SPT6_acidic
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
137023168
NCBI-ProteinID:
XP_067249474
LinkDB
All DBs
Position
1:complement(27628613..27650998)
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AA seq
641 aa
AA seq
DB search
MEGQDNADQGSSDQSEIQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
ADELLSRLRQVKDGPESPSNGTTEERREGPGATEVEGTEENPSGETLLDWLNTVRQTGNT
TRSGYRGNQSWRAVSQTNPNSGDFRFSLEINVNRNIAEQQTQTERLEGGQERADGPVSEP
ESLMETAEVVEEPVVDELAVIVEPELPVPSTLSLNREVNAPTLAPPTLASPTLAPPTLPP
VEQPRRGQIRARSRSPEQRRTRARTARGRSPLNLERLDGLPPTQHGLPSRHPEILPEPQV
EGSSRTRQLFLSRQSTVEMETQELGTAPDLPGTPQEREINAGEAGASGRRPPTIMLDLQV
RRVRPGEYRQRDSIANRTRSRSQTSNNTLLYETERGGFRRTFSRSERAGVRTYVSTIRIP
IRRISDAGLGEATSLALQSMIRQIMTGFGELSYFMDSDYPDSNREDNPPTDLTDALGNPD
ASTGTAASEADSHLPGHGGSNQGGLEARTEEREVEGGLPGAAGPRENRGRQRAPISLDET
GSLPFLRLAHFFLLNEEDDDQPRGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKL
RKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSTNRESVV
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcaggataatgcagatcagggcagcagtgatcagtctgaaatacagcgccga
agacagctggaccgtctggacagagaagaggccttctaccagtttgtcaacaatcttagt
gaggaagactacaggctcatgagagacaacaatctgcttggcacacctggtgaaattaca
gcagatgaacttttgagccgccttcggcaggtaaaggatggccctgagtcgccaagcaat
ggcaccactgaggaaagaagggaggggcctggtgcaactgaggtggagggcactgaggaa
aatcccagtggggagacccttcttgactggctcaacacagtacgacagacggggaatacc
acaaggagcggttaccggggtaaccagtcatggcgggctgtgagccaaaccaatcccaac
agtggcgatttccgtttcagtttggagatcaatgtcaatcgcaatattgctgaacagcaa
acgcagacagaaaggctggaggggggccaggaaagagcagatggccctgtgtctgagccg
gagagtctcatggagactgcagaggtggttgaggaaccagtggtagatgagttggctgtt
atagtagagccagagcttccagttcctagcaccctgtctctaaacagggaagttaatgcc
ccaactttagctcccccaactttagcttccccaactttagctcccccaaccttgcctcca
gtggagcaaccacgtaggggtcaaataagagctcgcagtagaagcccagagcagcgtcgg
acaagggctcgtactgcaagaggtcgttcaccgctcaaccttgaaagattggatggactt
ccacctactcagcatggcctaccttctcgacatcctgagatccttcctgagccccaggta
gagggaagctcaaggactcggcaattgtttttgtccaggcagagcactgtggaaatggaa
actcaagaattgggaacagcacctgacttacctggaacaccacaggaaagagagataaat
gctggagaggcaggagcctcaggtcgtcgtcctccaaccataatgctggatttgcaggta
cgtagggtgcgtcccggagagtaccgccagagagacagcattgctaaccgcacaaggtct
cgttcacagacgtccaataacactttattatatgagactgagcgcggaggtttccgtcgg
actttctcccgctctgagcgggctggagtgagaacatacgtcagtactatccgcattccc
attcggaggatctcagatgctggacttggtgaagccacttctttggctctgcagtctatg
attcgtcagatcatgactggtttcggtgaacttagctactttatggactcggactatcca
gactcgaaccgtgaagacaacccacctacagaccttactgatgcactgggtaaccctgat
gcttctactggaactgctgcaagtgaagctgattcccatcttcctgggcatggaggctcg
aaccagggtggtttagaggcacggacagaggaaagggaagtggaaggtggactgcctggt
gctgctggtcctcgggaaaacagaggcagacaacgggctcccatcagcctggatgaaact
ggatctctgccctttctgcgacttgcgcacttcttcttgctcaacgaggaagatgatgac
caacccagaggtctcaccaaagagcagattgacaacctatccatgcgaaactttggggaa
agcgatgcactcaaaacctgcagtgtctgcattacagagtatgctgaaggcaacaaattg
cggaagctgccctgctctcatgagtaccatgtgcactgtatcgaccgctggctttcagag
aactcaacctgccctatttgccgcagggcggttcttgtttccaccaaccgcgagagtgtt
gtctag
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