Chanodichthys erythropterus (predatory carp): 137023210
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Entry
137023210 CDS
T10334
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
137023210 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cery03009
]
137023210 (utp15)
Ribosome biogenesis [BR:
cery03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
137023210 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_SPT8
BBS2_Mid
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_Vps41
PEP5_VPS11_N
VPS11_N
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
137023210
NCBI-ProteinID:
XP_067246069
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Position
7:complement(26014958..26022186)
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AA seq
518 aa
AA seq
DB search
MASFKPTKIQIYPKLGEKVTEDTLYWKNYKPAVQIKEFGAVTKIDFSPLPPHNYAVTAST
RIHVYGPHSQEPIRSFTRFRDTAYGGSFRGDGKLLVAGSEEGLLRLFDISGRVALRQFTG
HSKAVHTTSFLSDGFRVMSGSDDLSCRVWDVASAVELSSFTEHTDYIRAAAPSKLNPDLF
FTGSYDHTVKVFDVRSGSSVMTMQHGHPVECVLLYPSEALLVSTGGRYVKIWDLLKGGEQ
LVSLKNHHKTVTCACLSSTGNKLLTGSLDRHVKVYNSSYKVVHNFDCAASILSLAIAPDD
EVVAVGMTNGVLSVRHRKHKEEKETITGRRRRGPAYRVFVKGKNFVPKQDDFLVSKPVKL
HLQKYDKQLKSFEVSKALDTALQTWTRTHKPEVTVAVIMELNRRGTLKNALAGRNEESLT
KILSFLLKHITDPRFSRPLLTVGDLVLDLYQQVIPQSPVVERLMQRLLDLLGREAELQQE
LLQVLGILDTLFASLTLRKEVTTLAAPPVAQGSQLQAA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttaaacccaccaaaattcagatctatccaaaactaggagagaaagtaaca
gaggatacgctctactggaaaaattacaagcctgctgtgcagattaaagagtttggtgct
gtaacaaagatcgatttctctcctctcccacctcacaattatgcggtcacagcctccacc
agaatccacgtatatggacctcactctcaagagcccatacggagcttcacacgttttcgg
gacacagcatatggagggagctttagaggtgatgggaagctgttagtggcaggaagtgaa
gagggactcctccgactgtttgacatcagtggccgagtggctctcaggcagttcacagga
cactccaaggcggtacacacaacctctttcctgtctgatgggtttcgtgtgatgtcgggg
tctgatgacctgtcgtgtcgcgtgtgggacgttgccagtgctgttgagctcagctcattc
actgaacacacagactatatcagagctgccgcccccagcaaactcaacccagatctgttt
ttcacaggttcgtatgaccacacagtaaaagtgtttgacgtgcggtcagggagcagcgtg
atgaccatgcaacacggccaccctgtggagtgtgtgctgttgtacccatcagaagccctg
ctggtgtccacaggagggcgctatgtgaaaatttgggacctgttgaaaggcggagagcag
cttgtttctcttaagaatcatcacaaaacggttacgtgtgcatgtctgagttctacaggc
aacaaactgctcacaggatcactggacaggcatgtcaaagtgtataactcttcctataag
gttgtgcataatttcgactgtgcggcatccatccttagtctggctattgcgcctgatgat
gaagtagtcgccgtggggatgaccaatggcgtgttgagcgtcaggcacaggaaacacaaa
gaagaaaaagagacgataactggtcgaaggcgacggggcccagcgtaccgggtctttgtc
aaggggaagaactttgtgcccaaacaggatgattttctggtcagtaaaccagtgaagctg
catctacagaaatatgacaaacagctaaaaagctttgaggtgtccaaagcactggacaca
gctctgcagacatggacacgcacccataaaccagaagtgaccgttgcagttatcatggag
cttaaccgcagaggaactctgaaaaacgctcttgcaggacgaaatgaagagagcttaacc
aagatactcagcttccttctcaagcacatcaccgacccacgcttctctcggcctctgctc
accgtcggggatcttgttcttgatctgtatcagcaggttattccccagtcacctgtagtc
gagcggttgatgcagcgtcttttagacctgttgggtcgggaggcagaacttcagcaggag
cttttacaagtcttgggaatcctggacacactttttgcatccttgaccctcagaaaagag
gtcaccacccttgccgccccaccagtagcacaggggtcacagctacaggccgcctga
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