Chanodichthys erythropterus (predatory carp): 137023341
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Entry
137023341 CDS
T10334
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137023341 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cery03021
]
137023341 (sf3b3)
03041 Spliceosome [BR:
cery03041
]
137023341 (sf3b3)
03036 Chromosome and associated proteins [BR:
cery03036
]
137023341 (sf3b3)
Transcription machinery [BR:
cery03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
137023341 (sf3b3)
Spliceosome [BR:
cery03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
137023341 (sf3b3)
Complex B
137023341 (sf3b3)
Complex C
U2 SnRNP specific factors
137023341 (sf3b3)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
137023341 (sf3b3)
TFTC complex
137023341 (sf3b3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
137023341
NCBI-ProteinID:
XP_067246404
LinkDB
All DBs
Position
7:complement(33935946..33959549)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISHAIHGNFSGTKQQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG
VIRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQAQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGSGQWASLVRMINPIQGNTLDLVQLEQNEAAFSVAVCRFSGGG
DDWYVLVGVARDMILNPRSVGGGYIYTYRLVGGGDKLEFLHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMAAADKFGNICVVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIINYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacctgactctgcagcgagcaactggcatctcccatgccatccatggc
aacttttcaggaactaagcagcaggagattgttgtttcccgtgggaaaatcctggaactg
ctgcgtcctgatgccaacacagggaaggtccacacactgcttactatggaggtgtttggt
gtcatccgatccctcatggccttcaggttgacaggtggaactaaagactatgtggtggtg
gggagtgactctggacgtattgtgatcctggagtaccatccctccaagaacatgtttgaa
aagatacaccaggagacatttggcaagagtggctgcagacgtattgtaccagggcagttc
ctcgctgtggacccaaagggcagagctgttatgataggtgccattgaaaagcagaagttg
gtatacatcctgaacagagatgcagctgcccgccttaccatctcgtcccctctagaggcg
cataaggctaatacactcgtctaccatgtggttggtgtggatgtgggctttgagaacccc
atgtttgcctgcctggaaatggactatgaggaggcagataatgatcccaccggagaagct
gcagcaaacacccagcagactctgaccttctatgagttggacttgggcctcaaccatgtg
gtgcgcaagtatagcgaggcactggaggaacatggcaacttcctcatcacagttcctgga
ggttcggatggacccagtggtgtcctcatttgctctgagaattatatcacctacaaaaac
tttggcgaccaaccggacatccgttgcccaatcccacgcaggaggaatgatctggatgat
cctgagagaggcatgatctttgtctgctctgccacccacaagaccaaatccatgtttttc
tttctagcccagacagaacagggcgacatctttaaagttacactggaaactgatgaggag
atggtgacggagatcaggatgaagtattttgataccatcccagtggccacagccatgtgt
gttttgaagactggcttcttatttgtttcttcagagtttggaaaccactacctgtatcag
attgcccacttgggtgatgatgacgacgaacctgagttttcttctgccatgcctctggag
gagggagacacattctttttccaacctcgtccccttaagaaccttgtgctggtggacgag
caagaaaatctttcccccatcatgtcctgccagattgctgatttggctaatgaagacacc
ccacagctgtatgtggcctgtggcagaggaccccgatctacactgagagttttgagacat
ggactggaggtgtcagaaatggctgtttctgaactgcctggtaaccccaatgctgtgtgg
actgtcaggagacatgtagaagatgagtttgatgcctacatcattgtgtcattcgttaat
gccaccctggtgctttctatcggagagactgtggaagaagtgacagactctggcttcttg
ggcacaacacccaccctgtcctgctcattgcttggggaagatgcacttgtgcaagtgtat
cccgatgggatccgtcacatccgtgcggataagagagtgaatgaatggaagactccaggg
aagaaaacaatcgtccgatgtgctgtcaatcagaggcaggtggtcattgctttgaccgga
ggagaactggtctactttgagatggacccgtctggacagctgaatgaatacacagaaagg
aaagagatgtctgcagatgtggtgtgcatgagtttggcaaatgtaccccctggtgaacag
cgctctcgcttcctggctgttggattggtggacaatactgtccgtatcatctccctggat
ccatccgactgtctgcagccattaagtatgcaggctcttccggcccagccagagtctctt
tgtattgtggagatgggtggagtagaaaaacaggatgaactaggagaaaagggcaccatc
ggcttcctatacctcaatattggcctgcagaatggagtgttactgcgtactgttttggat
ccagtgactggggacctatctgacactcgaacacggtatctcggttctcgtcccgtaaag
cttttcagagtccggatgcaggcccaagaagctgttttggccatgtccagtcgttcctgg
ctgagttactcataccagtctcgcttccacctgaccccactgtcatatgaaaccttagag
tatgcttcaggattcgcttctgaacagtgtcctgaggggattgttgccatttccaccaac
acactgagaattttggctcttgagaaactgggtgccgtcttcaaccaggtggcattccca
ctgcaatacacgcctcgtaagtttgtcatccacccagaaactaacaacctgatcctgatt
gagacagaccacaatgcctacaccgaagccaccaaagcccagcgcaagcagcagatggct
gaggaaatggtggaggcagcgggggaggatgaaagagagctggctgcagaaatggcagca
gctttcttgaatgagaacctgccagaagccatctttggggcacctaaagcaggttctggg
cagtgggcttcactagtacgcatgatcaaccccatccagggcaatacactggacctggtg
cagctggagcagaacgaggcagctttcagtgtggctgtatgtcgcttttctggtggaggc
gatgactggtacgtgttggtgggcgttgccagagatatgatactaaatccgcgttccgtt
ggtggaggatatatttatacctatcgcctagttggaggtggggacaagctggagtttttg
cacaagacacctgtggaggacgtgcccttggctatcgctccctttcaggggcgagtgttg
gttggtgtaggcaaactcttgcgcatctatgacttgggaaaaaagaaactacttcgcaag
tgtgaaaacaagcatgttcctaacttggtgaccggcatccacactattggccagcgtgtg
attgtgtctgatgttcaggagagtctattctgggtgcgctacagacgcaacgagaaccag
ctcatcatatttgctgacgatacatatcctcgctgggtcacgactgcctgcctgcttgat
tatgacaccatggctgccgcggataagtttggaaatatctgcgttgtccgcctgcccccc
aacaccagcgacgatgttgacgaggatcccacagggaacaaggcattgtgggacagaggc
ttgcttaatggagcatcacaaaaggctgaggtgattattaactatcacataggagagact
gtgctgtccctccagaaaaccaccctcatccctggaggatcagagtccctggtgtacacc
acgctatcaggaggcattggcatcctggtgccgttcacctctcatgaggatcatgacttc
ttccagcacttggagatgcacatgcgttctgagtttcctccactgtgtggtcgtgatcac
ctcagcttccgctcatactatttcccagtgaagaatgtgattgatggagacctgtgtgag
cagtttaactccatggacccccataagcagaagagtgtctctgaagaattggaccgcaca
cctccagaggtgtcgaagaaactggaagacatcagaacacgctatgccttctag
DBGET
integrated database retrieval system
