Chanodichthys erythropterus (predatory carp): 137023386
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Entry
137023386 CDS
T10334
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137023386 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137023386 (edc4)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137023386 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
137023386 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_EDC4L
WD40_Prp19
Pdc1_Ge1
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
137023386
NCBI-ProteinID:
XP_067246486
LinkDB
All DBs
Position
7:complement(35964192..35993816)
Genome browser
AA seq
1394 aa
AA seq
DB search
MASNSNMDIEGATQHLRDILKLDRPGNSAETSLVESQRNLSFNGELNGVLGADIIGAGGH
AAMVEPTSHNSDKLNGQDTQTICLSGDDESTCVSIRANNVEIVSSRDSSIDSKARGSNKV
KIQPVAKYDWEHKYYYGNLIAVSNSYLAYAIRGANNHSMIRVLQLGSTERSLLKGFTGAV
TDLAFAHLDSTLLGCVDEAGNMFIWQLTSHSNKIQDEVVVHIRRPEDTPLNSNRRLIWCP
FIPEDNDENPEDACQTLALLHEDRAEVWDLDILRSNNSSWPVDATELKEGFITIRGHTAR
ISEGALSPDGTVLATASHDGYVKFWQIYIEGQDQPRCLHEWQPHNGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPFNSSVLPSLKASLDLSAEF
LILSDVQRKVLYVMELLQNQEKGRASFTAVSEFLLTYPVLSFGVQDVARARLRHTEVLPP
DEESESMTTEGSQGPSESKSGIQIKLYCVHTKSLQDVQIWFQPNQGASLFMPQSGSQDGF
GFSDPLADLNVEAMSSDKESGDSGSQNDLSKILPLPSPADFMSPAPSALPKLMTPDAFMT
PSTSMPASPGSSASSLTIVTAMSSSDSGARGGDDLAQSPKMSVECGNSSLTRSANAGSPR
SNSILISGLGENIQVLMDMVSSPNPPLSLDLQSIEPMVVPQASPTRARSPDVISSASTAM
SQDIPEIASETLQRGLASAAADSVPVLHSDSMASAASVLHLLSPRARSSAEHSLLPLELG
AASVDGEQRLNNTPSLLETALSQENAVAAGGSCSDSSVNHAWPAAPDITRETRNSLRDNG
LGDCSREEIKDRHISSPYHRRTYHLTQNDSQDASAEQSDHDDEVASLASSSGNCGPRSSH
RLPVKDWKTSPRSSPKLKRKSKKDEGESSQSRQLESQMSTEVQDELLQMLRSQQRELAEL
RQNQLDLLQRVTSHMDAIQSSIMAHIEHSMLAQQEQEQRRMERILAEGQSRNQQLQDQLV
QQLVQTLNNSLCNRLDKVLREEMKKIVPQSISKSLEPLTGQMSSTIAAKLTAVEGTLKEN
VTKVVKSKNTTDAIGRAAAEAMQGPIQAAYKETFQSIVLPVFERGCQSMFQQINDSFKQG
THEYIQQLETHIKNRKQRDQDARDPVIGQLQQMIDTLQSSQDQLATTVTASVCSDVQHQL
HMIVGNLQDSILTQVQRIVKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPVPSTHLDYQAQ
QASILQLLQQGQLNEAFQQALSAADLNLVLYVCETIDSQQVFSQQPCPLHQAVLLSLIQQ
LSTNLSSRTELKISYLEDAVMNLDHGDPVTRDHMSAVLTQVRQKLFHFLQQDAHSPLSKR
ARRLMMMLQGLVNH
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaattccaatatggacatagagggcgcgacccagcaccttcgggacatctta
aaactggatcgtcccggtaattcggccgagacctctttggtggagagccagagaaatcta
tctttcaatggagagttgaatggagttcttggagcggatattatcggagcaggaggacat
gcagcaatggtggagccgacttctcacaactctgacaaactcaatggacaggacactcag
accatctgcctttcaggagatgatgagtccacctgtgtctccatcagagcaaacaatgtg
gaaattgtgtccagccgtgactctagtattgacagtaaagctcgtggtagcaacaaggtt
aaaattcagccagtggccaaatatgactgggagcataagtactactatggcaatttaata
gccgtgtccaactcatacttggcttatgccatcagaggtgcaaacaatcattctatgatc
cgtgtgctgcaactgggctcgacggagcgttcgctgctgaagggcttcaccggtgcagtc
acagaccttgctttcgcccacttggactcaaccctcttgggctgcgtggatgaggctgga
aacatgttcatttggcagctcactagtcacagcaacaaaatacaagatgaagtggttgtt
cacatccgtaggcctgaggacactccactcaattccaaccgcagactcatctggtgtcct
ttcatcccagaagacaatgatgagaacccggaggatgcatgtcagacattagcactgctt
catgaagacagagctgaggtttgggaccttgacatcctccgatccaataacagctcatgg
cctgtggatgccactgaactgaaagagggattcatcaccattagaggacacacagcacgc
attagtgagggagcgctgtcccctgatggcacggtcttggccacagccagtcatgatgga
tatgtcaaattttggcaaatctacattgaaggacaggaccaacccagatgtttgcatgaa
tggcagccacataatggacgtccactttcttgcctgctcttttgtgacaatcacaagaag
caagacccagaagttccgttttggcgcttcctgatcactggagctgatcagaaccaggag
ctgaagatgtggtgcacagtgtcatggacctgcttacaaaccatcaggttttctccagat
ccatttaacagcagtgtgctacccagcctgaaggccagtttggacctgtctgcagagttt
cttattcttagtgatgttcagaggaaggtgttgtacgtcatggagctgctacagaaccag
gaaaaaggtcgtgccagcttcactgcagtttcagagtttctgcttacatatcctgtgctc
agcttcggtgtacaggatgttgcccgcgcccgactgcgccacactgaggtccttccccct
gatgaggaaagtgaaagcatgacaacagaaggaagccagggaccctcggaatccaaatca
ggaatccagattaaactctactgtgtgcatacaaaatcactacaggatgtgcagatctgg
tttcagcccaatcagggggcctcccttttcatgcctcagtctggatcccaggatggcttt
ggtttttctgacccactggccgatctgaatgtggaggcaatgagctctgataaagagtct
ggtgacagtggatcacagaatgacttgagtaaaattctgcctcttccaagtccagctgac
ttcatgagtccagccccatcagccttgcccaaactcatgaccccagacgcctttatgacg
cccagcacctctatgcccgcctctcctggcagcagtgcgagcagcctgaccatagtcacg
gccatgagcagttcagacagcggtgcaaggggtggagatgatctggcccagagccctaag
atgtctgtcgaatgtggcaacagcagcttgactcggagtgccaatgcaggcagtccaaga
tccaactccattctcatctcaggccttggggaaaacatccaggtattaatggacatggtt
tcctctccaaaccctcctctctccctggatctccagtccatagagcccatggttgtccct
caagcctctccgaccagagctcgctctccggatgtcatttcctctgcttctacggcaatg
tcccaggacatccccgagattgcctcggagaccctgcagaggggactggccagtgccgct
gctgattcagtccctgtcctgcattctgacagcatggcatcagccgcatcggtcctccac
ctgctgtctccaagagcccggagcagtgctgaacacagtttgctgcctcttgaattgggt
gcagcatctgtggatggagaacagagactcaataacacaccctccctactggagacggct
ctgtcacaggagaacgctgtagcggctggaggttcttgttctgacagcagtgtgaaccat
gcatggccggcagcacccgatatcacacgagagactcgcaacagcctgagagacaatggt
ttgggagactgctctagggaggaaataaaggacaggcacatttcttctccctaccacaga
cgcacctatcacctgactcagaacgacagtcaagatgcaagtgcagaacagagtgatcat
gatgatgaggttgccagtctggcctcctcctcggggaactgtggcccccgctcctcgcac
agacttcccgtaaaggactggaaaacatcaccccgcagctcccccaagctcaagaggaag
agcaagaaagatgaaggagagtcctcccagtctagacagcttgagagccagatgagcaca
gaggtgcaagacgaactcctgcagatgttgcggagccagcagagggagttagcagagctg
agacagaaccagctggaccttctgcagagagtcaccagccacatggatgccatacagagc
tccatcatggctcacattgagcactccatgttggctcagcaggagcaagaacagagaaga
atggagcgaatcctggctgagggacaaagccggaaccaacagcttcaggaccagctggtt
cagcagcttgtccagactctgaacaacagtctgtgcaaccggctagacaaagttttgcgt
gaagaaatgaaaaagatcgtcccacagtccatatcgaagagtctagaacctttgactggc
cagatgagcagcaccattgctgccaagttaaccgcagtggaaggaacactgaaggaaaat
gtcaccaaagttgttaagtccaagaacactacagatgccattggtcgtgctgctgccgag
gccatgcagggccccattcaggcagcatacaaagagaccttccaaagcattgtgcttccc
gtgtttgagagaggctgccagtccatgtttcagcagatcaatgacagcttcaaacaggga
acccatgagtacatccaacagctggagacacacatcaagaacaggaaacagcgggaccag
gatgcacgggatcccgtgattggccagctgcaacagatgattgacacgctccagagttct
caagaccagctggccaccactgtgacggccagcgtgtgctctgacgttcagcatcagctc
cacatgatcgtgggaaatctgcaagactcaatcctgacgcaggtgcagcgcatagtgaag
ggagaagtgagtctggccatgaaggagcagcaggcagccgtcacctccagcatcatgcag
gccatgcgctcggctgcaggaacgcccgtcccctccacacatttggactatcaggcccag
caggccagcatacttcagttactacagcagggccagctcaacgaggccttccaacaggct
ttatccgcagcagacctgaatctggtgctgtacgtgtgcgagaccattgactctcagcaa
gtgttcagccagcagccctgtccactccatcaggccgtcctcctgtctctcatccagcag
ctctccaccaacctgagctcacgcacagaactcaagatcagctatctagaagatgctgtg
atgaacctggatcatggagatccagtcaccagagaccacatgtctgcagtgctgacccag
gtacgacagaagctcttccacttcctgcagcaggacgcccacagccctctgagcaagcgt
gcacggcgcctcatgatgatgctgcagggcctggtcaatcactag
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integrated database retrieval system
