Chanodichthys erythropterus (predatory carp): 137023808
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Entry
137023808 CDS
T10334
Symbol
samm50l
Name
(RefSeq) sorting and assembly machinery component 50 homolog B
KO
K07277
outer membrane protein insertion porin family
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
137023808 (samm50l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cery03029
]
137023808 (samm50l)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cery02000
]
137023808 (samm50l)
Mitochondrial biogenesis [BR:
cery03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
137023808 (samm50l)
Transporters [BR:
cery02000
]
Other transporters
Pores ion channels [TC:
1
]
137023808 (samm50l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
137023808
NCBI-ProteinID:
XP_067246998
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Position
8:complement(5274832..5283308)
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AA seq
469 aa
AA seq
DB search
MGTVHARSMDSYPMYGRDMGVNPDDMEMMEAVQETKQEVLENKDVVVQHVNIEGLGRTKE
DYLGYEISDVFTARNLVEVMRKSHEARQRLLRLGIFKDVEVVIDISEGADALPNGLDVTF
EVTELKRLTGSYNTMVGNNEGSMVLGIKLPNMIGRGEKLTFQFSYGTKETSYGLSFFKPQ
SGYYERNFTLNLYKVTGQFPWSSLKETDRGVSTELSFPLWMTDHTLKWEGVWRELGCLAR
SASFAVREESGHTLKSALSHTMVVDTRNSAILPRRGALLRINQELAGYTGGDASFLKEDV
ELQLNKPFIWGSVLSASLWGGMIFPLGRQPTSIADRFYLGGPTSVRGFGMYSIGPQSEGD
YLGGEAYWASGLHLYTPLPFRSNKGGLADLFRTHFFLNAGNLCNLNYGEGPHAHLQKLAE
CIRWSYGAGIILRLGNIARLELNYCFPMGVQSGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtgcacgcgcggagtatggattcttaccccatgtatgggcgagatatgggc
gtcaacccagatgatatggaaatgatggaggcggtgcaagaaactaaacaagaggtttta
gaaaataaagatgttgttgtacagcatgtcaacattgaagggttgggtagaactaaagag
gattacctgggctatgaaatctctgatgtcttcactgccaggaacctggttgaagtgatg
agaaaatcccatgaggccagacagaggttgcttcgtcttggcatattcaaagacgtggag
gtggtgattgacatctcagaaggagcagacgctctgccaaatggacttgatgttacattt
gaggtgactgagcttaaacgactcacaggcagttataataccatggttggaaacaatgaa
gggagtatggtcttgggcattaaacttccaaacatgattggccgaggagagaagctcacc
tttcagttttcctatggaactaaggagacgtcctacggcctgtccttctttaaaccacag
tcaggatattatgaacgcaacttcactctaaacctgtacaaagtcaccggccagttcccg
tggagctctctaaaagagacggacaggggagtttctacagagctcagtttccctctgtgg
atgacggatcacactctgaagtgggagggcgtgtggcgtgagctgggatgtctggcccgc
agcgcctccttcgctgtgagagaggagagcggccacactcttaaatccgccctttctcac
accatggtagtagacaccaggaactctgccatcttgccgcgaagaggtgccttactgcgg
atcaaccaggagctggcaggatacaccggcggtgatgccagctttctcaaagaggacgtt
gagctgcagcttaacaaaccatttatctggggatcggtgttgtctgcatctttatggggt
gggatgatctttcctctcgggcgtcagcctacctctattgctgacaggttctacctgggc
ggcccaaccagtgtgagaggtttcggcatgtacagtataggccctcagagtgaaggtgat
tatctgggcggggaagcgtattgggctagtgggcttcacctgtacacacccctccccttc
cgctcaaacaagggcggtctggctgacctctttaggacacatttcttccttaatgctgga
aacctttgcaacctcaactacggagagggtccacatgcacatctgcagaagttagcagag
tgtatccgttggtcttacggcgcaggaataattctacgtctgggaaacattgctagactt
gaactcaattactgcttccccatgggtgttcaaagcggagacaggatatgtgacggtgtg
cagtttggagcaggcatccgtttcctgtga
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