Chanodichthys erythropterus (predatory carp): 137024364
Help
Entry
137024364 CDS
T10334
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cery04121
]
137024364 (mkrn1)
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137024364 (mkrn1)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137024364 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-ANAPC11
zf-rbx1
zf-C3HC4_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
137024364
NCBI-ProteinID:
XP_067247880
LinkDB
All DBs
Position
8:10915131..10926117
Genome browser
AA seq
439 aa
AA seq
DB search
MAEAAAASTAAPAVIGGWTKHVPCRYFMHGLCKEGDNCRYLHDLSSCKPTMICKFFQKGC
CAFGDRCRYEHTKPAKQDEVPSSKPSVPLTAAPLAGTPDPVSDGPGGTTDAQEKPQGLGA
VDWVNAAEFVPGQPYCGRADPVLCEGPGPLIEEEYEKDLANKELKKQLCPYAAVGECRYG
LNCAYLHGDVCDMCGLQVLHPTDTSQRSQHIRACIEAHEKDMEISFAIQRSKDMMCGVCM
EVVFEKTNPSERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSE
YWVEDKDEKQQLIQKYKDGMGSKPCRYFDEGRGTCPFGANCFYKHAFPDGRLEEPQPQRR
QTGSNGRNRNSRRTPLWDLFEERENSDSFDNEDEEMVTFELSEMLLMLLAAGTDDDVTDS
EDEWDLFHEELDDYYELYL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcagcgtcaacagcggctccagcagttatcggaggctggacgaag
cacgtaccctgcaggtatttcatgcacggcctttgcaaagagggcgacaactgtcgatat
ttacacgacctcagcagctgcaagccaaccatgatctgcaagttctttcaaaagggatgc
tgtgcttttggggaccgttgcaggtatgaacataccaaacctgccaagcaagacgaagtc
cctagttctaagccgtcggtgccgctgaccgctgctccccttgctggcactcctgatccc
gtttctgatgggccaggtggcacgaccgacgcccaggagaagccccaaggcttgggggca
gtggactgggtcaatgctgccgagttcgtgccagggcagccctactgtgggagggctgac
ccagtgctgtgtgaggggccgggtcctctcatcgaagaagagtatgagaaagacctagct
aacaaagaattgaagaaacagctttgcccgtacgccgctgttggcgaatgtcgctatggc
ctcaactgcgcctacctccacggcgacgtttgtgacatgtgcggcctacaggtgctccac
ccaaccgacacctctcagcgctcgcaacatatcagggcctgcatcgaggctcacgagaag
gacatggaaatatcgtttgccatccagcgtagtaaggacatgatgtgtggcgtgtgcatg
gaggtggtgttcgaaaaaaccaaccccagcgaacgccgttttggcatcctctccaactgc
agccactgctactgcctcaagtgcatcaggaaatggcggagcgccaagcagttcgagagc
aagatcataaagtcctgcccagagtgtcgaatcacatcgaactttgtcataccaagcgaa
tactgggtggaggacaaggatgagaagcagcaactcattcagaagtacaaggatggcatg
gggagtaaaccttgccgatattttgatgaaggccgtgggacctgtccgttcggagccaac
tgcttttacaagcatgcttttcctgatggccgtctggaagagcctcaaccccagaggaga
cagaccggctccaatggaagaaaccggaactccagacggacgccactctgggatcttttc
gaggagcgggagaacagcgactccttcgacaacgaagacgaggagatggtgacgttcgaa
ctcagcgagatgcttctcatgcttctggctgctggaaccgacgatgacgtcaccgactcc
gaagatgagtgggacttgttccacgaagagctggacgattactatgagctgtacctatag
DBGET
integrated database retrieval system
