Chanodichthys erythropterus (predatory carp): 137024565
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Entry
137024565 CDS
T10334
Symbol
usp6nl
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137024565 (usp6nl)
Membrane trafficking [BR:
cery04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
137024565 (usp6nl)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
137024565
NCBI-ProteinID:
XP_067248355
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Position
8:complement(20194977..20264810)
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AA seq
856 aa
AA seq
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MQVLQIVKELVSPSRRRASGRFAASNSEQDAAVKLEQERAEILAKYDKGKESAEVEPWEE
ANFDLYKAVDRFGFLHEDELPMYDIVEEKQKHLEVERTTKWLKMLKSWEKYKNSDKLVRR
IYKGIPLQLRGQVWCLLLDVPKIKEEKKDFYEKLKIRARGLSPDVRQIDLDVNRTYRDHI
MFMHRYDVKQQDLFHVLTAYSIYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLSGQ
RHAMHGFFVPGFPKLMRFQEHHDRILQKMMPKLKQHLDNQEVFTSLYTMKWFFQCFLDRT
PFTLTLRIWDIYILEGERVLTAMSYTILKLHKKTLLKLSMEDLVKFLQVTLSKDFFFEDD
FVIEQLQNSMSELRRSKLDLPPPGKEDEFPKKPLGQLPPEPPGLAAAATNHVANGQPVGQ
TGEGLPHRGPSPAASISKRAESGPITDGTPERYQESRPSSSLDKVPHPERDRRGVDPQKE
RIPTHMPNNSATAGGKALTQNQTNHNSNARSSMRRDKPRWVKPSEGKLEAVKAAALRESQ
SSLTMGVPPSPSSPTPEEATGAQRRPRSRAFAPGSNRASNASQYDNVPGPDGEVMEIIEL
EKPPSRPPSRPYVGPSLRQGSPTRPPSGGTSVSPFRVSKQSMMQSKPEPRAPLHYPPGIT
PVYTPYVSDSRPEDRLYSQPYAEQIYATTGRGSSNPSPEKTLMNNSYLTYRRPPPNMPPL
RVAPAELSSQVDSVSEGGYYMRQPTRLVGSPAYPPTELRYEGHRRREGWYGDMEAGPPRS
PVGLPRSPSFQKAQLSPVHPVQEFNFAPANISDAVHHFRGPYQEHSGRQQLPHPLFGGAH
YRQAQEAFAMQESMLL
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgctgcagattgttaaggagctggtgtcgccctctcgccgtcgcgccagcggt
cgttttgcagcgtctaattcagagcaggatgccgcagtgaagttggaacaggagcgagct
gagatactcgccaaatatgacaagggtaaagaaagtgcggaggtggagccgtgggaggag
gccaattttgatctgtataaagcggtggaccgcttcggattcttgcatgaggatgagctt
ccaatgtatgacatagtggaagaaaagcaaaaacatctggaagtggagagaacgacaaaa
tggctgaaaatgttgaaaagctgggagaaatacaagaatagtgacaagctggtgaggaga
atctataaaggaattccactgcagctcagaggtcaggtttggtgtcttctgctcgacgtc
cccaaaatcaaagaggagaagaaagacttctatgagaaactgaagatcagagcaaggggt
ttgtctccagatgtccgtcagattgatctggatgtgaatcgtacatatagagatcacatc
atgttcatgcaccgttatgatgtcaaacagcaggatctgtttcatgtgcttacagcatac
tccatttataacacggaggtgggctattgtcagggcatgagtcagatcactgctctgtta
ctcatctatatgaatgaggaagatgctttctgggcactggttaagctgctctctggacag
agacatgccatgcacggtttctttgtaccagggttccctaaactcatgcgcttccaggag
catcatgaccgtatcctgcagaagatgatgcctaagctcaaacaacatctagataaccaa
gaggtgttcaccagcctgtacactatgaaatggttctttcagtgtttcttggatcggact
ccgtttacacttacgctgagaatatgggacatttatattttggaaggagagcgagttttg
actgcgatgtcctacaccatcctcaaactacacaaaaagaccctcttgaagttgtccatg
gaggatctggtgaagtttctgcaggtgactctgtcaaaggatttcttttttgaggatgac
tttgtgatagagcagcttcaaaactccatgtctgagctcagacgatctaaattggatctg
ccacctccaggtaaggaggatgagtttcctaagaaaccattaggtcagctcccccccgag
cctccaggattggcggcagcagcaaccaatcatgtggctaacgggcagccggtcggacag
acgggtgagggtctaccccatcgtggtccgagccctgccgcaagcatcagtaaacgagca
gagtctggtcccatcactgatggaacaccagagaggtaccaagagagtcggccatccagc
tcactggacaaggtgcctcatccagaaagggatagacggggtgtagaccctcaaaaggag
aggatcccaacccacatgcccaacaacagtgcaacagctggtgggaaggcgttgacccag
aaccagacaaatcacaactccaatgctagatccagcatgcgcagggacaagcctcgttgg
gtcaagccttccgaaggcaaactggaagcagtcaaggctgcagcacttcgggaaagccag
tcgagtctaactatgggtgttccaccctcgcccagctccccaactccagaggaggccacc
ggggcacagcgccgcccccgttcacgcgcatttgctccaggctccaaccgcgcttcaaat
gcctcgcaatacgacaatgtcccaggaccagatggagaggttatggagattatagagctg
gagaaaccaccttctcgccccccatcccgaccatacgtcggaccttctttgagacaaggc
agtcccacccgtcctcctagtggtggaaccagtgtttctccatttagagtgtccaaacag
agcatgatgcaatccaaaccggaacctcgtgcacctctgcactatccacctggcattacg
cctgtctacactccctacgtttcggattctcggccagaggataggctctacagccagccg
tacgctgagcaaatttacgcaactacgggacgtggctcatctaacccttcgccagagaaa
actttgatgaacaacagctacttaacctaccgacggccaccgccaaacatgccccctctc
agggttgctccggctgagctttcatcccaggtagacagtgttagcgagggtgggtattac
atgaggcagcccaccagattggtggggtctcctgcttacccgcccacagaactacgttat
gagggacacagacgaagagagggctggtatggggacatggaggcagggcctccgcgatct
cctgtgggactaccacgatctcccagcttccagaaagctcagctgtctcccgttcacccc
gttcaggagtttaactttgcacctgcaaatatttcggacgctgtgcaccatttcagagga
ccctaccaagagcactccggcaggcaacagctcccccacccactgttcggaggagcacac
tacaggcaggcgcaggaggcctttgcaatgcaggagtccatgctgctctga
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