Chanodichthys erythropterus (predatory carp): 137026412
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Entry
137026412 CDS
T10334
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cery03036
]
137026412 (smarcad1a)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
137026412 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
HBS1_N
CUE
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
137026412
NCBI-ProteinID:
XP_067249852
LinkDB
All DBs
Position
9:complement(18679245..18688904)
Genome browser
AA seq
973 aa
AA seq
DB search
MSFFNLDRFRFQRDNAVDRHGKSLDESSSDKENQRAAHQRKTDGRCASGKASRHTLEDVF
ADDKAVKMCKGSTSESKDQMNKEMEDRIIKLLEIFPQKSKKDLMEVVESTSTLEGAIAHC
LMVYGDEDSGRQKGKAGHSEDGDNQPKKRRKIVHSDSESEEDEDSEDDESQEPSRERQEA
LLKKMKKKLPDIEKEVLRDVLREHEWDYENALGSLLVFSSTDSSSPEDQRKQKSKSSHSK
EKNGKSLQKPDSSSSLSKWLTAVPSPMSKVSSVSTPKTQKSAVSKNTTKNTSYKRKRDDK
LPLNDISASEDEDEIDSDVESVSDDLDSEDEDSVSSSLQDKIIQFLQEASLDELALISGC
SIKKAQKIISLRPFNTWKDVKEQFYKDNGLSIELVHGCKVVLKERQVVRDLMGRCEKIAQ
KMTKDVTQVIEAGMGSIKQPKILSSNFKLQPYQLIGLKWLILLHQHKLSGILADEMGLGK
TIQAIAFLAHLYEKGIKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQ
DILSGLIEFNIIVSTYNLTIGNDHDRSLFRKLRLKYAVFDEGHMLKNMNSLRYRHLMAIN
AEHRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTSQISKMFSTRSSEEESSFHKERIAQ
ARLIMKPFILRRVKREVLKQLPPKVEKIEMCPMSDAQQKLYDKLFKRLKKTPNGDKRELC
NVMMQLRKMANHPLLHRQYYTTDKLAAMSKAMLKEPTHFDADPALIQEDMEVMSDFELHN
LCKQYSSISSFQLDKELILDSGKFALLTKTLAELKEKGDRVVLFSQFTMMLDIVEILLKH
LDHQFVRLDGSTPMAERIGLIDKYNTSPEIFVFLLSTRAGGQGINLASANTVILHDIDCN
PFNDKQAEDRCHRMGQTRTVQVIKLISRDSIEACMLRVGQEKLKLEQDMTTDEGEDGAMT
EQMAELLKVSLGL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttttaacctggaccggttccgtttccaaagggacaatgcggtcgacaggcac
ggtaaatcattggatgaatctagctcggataaggagaaccaacgggcagcccaccaaaga
aagacagatggtcgatgtgcatcaggcaaggcatcaagacacacactggaggatgtattt
gcagatgataaagctgtcaagatgtgcaagggttcaacatcagagtccaaggaccagatg
aacaaggagatggaggacagaatcatcaaactactggagatcttccctcagaagagtaag
aaagacctaatggaggtggttgagagcaccagcacactggagggagctatagcacattgt
ttgatggtttatggagatgaagattcaggcagacagaaaggcaaagcgggacatagtgaa
gatggtgataatcaaccaaagaagaggagaaaaattgtgcattcagattcagaatctgag
gaggatgaagattctgaagatgatgagagtcaagagccaagcagagagaggcaggaggct
ttgttaaagaagatgaagaagaaactgcctgatattgaaaaagaggtcctgagggatgtc
ctgagagagcacgaatgggactatgagaatgccttgggatcactgcttgtgttttcatca
acagattcaagttcaccagaagatcagagaaaacaaaagtcaaaatcatctcactccaag
gaaaaaaatggcaagagcctacaaaagcctgacagctcgtctagtctgtcaaaatggctg
acagcagtaccatctcccatgtcaaaagtttctagtgtgtctactccaaaaacacaaaaa
tctgcagtcagcaaaaacaccaccaagaacacatcctataaacggaagagggacgataaa
ttgcctctaaatgacatcagtgcgtctgaggacgaagatgagattgacagtgatgttgag
agtgtatctgatgatctggactctgaggatgaggacagcgtctctagcagtcttcaggac
aagatcattcagtttctccaagaggcttcactagatgagcttgctctgatatctggctgc
tcgatcaaaaaagcccagaagatcatttcactgaggccgttcaacacttggaaagatgtg
aaagagcagttctataaagataatggcctgtctatagagctggtacatggctgcaaggtg
gtgcttaaggagaggcaggtggttagagacctcatgggaagatgtgagaagattgcacag
aaaatgactaaagatgtcacccaggtcatagaagcgggcatgggctccatcaagcaaccc
aaaatcctgagcagcaatttcaaactacaaccatatcagctgatcggcttgaagtggctg
attcttctgcaccagcacaagctgagtggcatcctggcagatgaaatggggttgggtaaa
acaattcaggccattgctttcttggctcatttgtatgaaaaaggaattaagggccctcat
cttattaccgtaccctcgtccacactggataactgggttcgtgaactgggtctttggtgc
cccagtctcaaagttcttatttactatggttctgtggaagatcgcaaatatttgcgacaa
gacatcctcagtggcttgattgaattcaacatcatagtatccacttacaatctcacaata
gggaatgaccatgaccgcagtctgttccgcaagctgaggctgaagtatgcagtgtttgat
gagggccacatgctgaaaaacatgaactcgctgcgctaccgccacctcatggccatcaat
gctgagcacagattgctgctgactggaacacctttacaaaacaacctgctggagctcatg
tccctgctgaacttcatcatgccctctatgttctctagcagtacctcacagatctccaaa
atgttctctacgaggtcgtcagaagaggaaagcagttttcataaggagagaatcgcacag
gccagacttatcatgaagccattcatcctgagacgagtcaagcgtgaggtgttgaaacag
cttccaccaaaagtggagaaaattgaaatgtgtcccatgagtgatgcccagcagaagctg
tatgacaaacttttcaaaagactcaagaagactccaaatggagacaagcgggagctttgc
aatgtgatgatgcagctgagaaagatggctaatcatccgttgctgcaccgccagtactac
accactgacaaattggctgccatgagtaaagctatgcttaaggagccgacacattttgat
gccgaccctgcactgatccaggaggacatggaagtgatgtctgattttgagctgcataat
ttatgtaagcagtacagctccattagcagttttcagctggataaggagctcatcttagac
tctgggaagtttgcgctgttaaccaagacactcgctgagctcaaagaaaagggtgacagg
gttgtgcttttcagtcaattcaccatgatgttggacattgtggagattctgctcaaacac
cttgatcatcagtttgttcgactggatggttctactcccatggcggagaggattggtctc
attgacaaatacaatacaagtcctgagatctttgtgttccttctgtcaactcgggctggt
ggccagggaatcaaccttgcctcggctaacacagtcatactgcatgacattgattgcaat
ccatttaatgataaacaagcagaggaccgctgtcaccgaatgggacagaccagaacagtg
caagtgatcaagctcatcagcagggactcgattgaggcttgcatgctccgcgttggacag
gaaaagctaaaattggaacaggacatgaccactgatgaaggtgaggatggtgctatgact
gaacaaatggcagagctgctcaaagtctcacttggcctttaa
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