Chanodichthys erythropterus (predatory carp): 137026846
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Entry
137026846 CDS
T10334
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cery01009
]
137026846 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137026846 (hdac6)
04131 Membrane trafficking [BR:
cery04131
]
137026846 (hdac6)
03036 Chromosome and associated proteins [BR:
cery03036
]
137026846 (hdac6)
Enzymes [BR:
cery01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
137026846 (hdac6)
Protein phosphatases and associated proteins [BR:
cery01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137026846 (hdac6)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
137026846 (hdac6)
Membrane trafficking [BR:
cery04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
137026846 (hdac6)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
137026846 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
137026846
NCBI-ProteinID:
XP_067250495
LinkDB
All DBs
Position
9:complement(7244322..7259641)
Genome browser
AA seq
1086 aa
AA seq
DB search
MDPVPVSKGSTRSPRGTPETKKENNNPNHKKSLQDARRKGRMDRSKVEEEMSNELQNLDV
RGKTKAAGTGLVYVDAFTHFHCLWDASHPECPARVSTVMETLETEGLLGRCVRVEARAVS
EDELLLVHTKDYVELMKSTQKMTEEELKTLSYKYDSVYLHPEFFTSACMAVGSVLQLVDK
VMTSQLRNGFSVNRPPGHHAQADKMNGYCMFNNLAIAARYAQKQHGVERVLIVDWDVHHG
QGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKVGMEDG
DYITAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDLKGEMRVSPQCFSILTHMLKGVAQGR
LVLALEGGYNLQSTAEGVCASVRSLLDDPCPHLTSPGAPSESALKSISKTISALYPFWKS
LQTFEGGPLSNATPLPAPVCAEVKVSSPITGLVYDQRMMHHHNMWDGHHPELPQRISRIF
TQHEELGLLSRCHRIPARLATEEELALCHSSEHISTIKSTEHMKPRDLHRLGNNYNSIYI
SNESYTCALMAAGSCFNSVQAILTGQVRNGVAIVRPPGHHAEKDTACGFCFFNTAALTAR
YAQSITHKSLRVLILDWDVHHGNGTQHIFEEDDSILYISLHRYEDGTFFPNSEDANYDKV
GQGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPISREFAPELVLVSAGFDAARGDPLGG
YQVTPEGYAHFTHQLMSLAAGRVLVILEGGYNLTSISESMSMCTSMLLGDSPPPLEHLPP
PKTSAAVTINNVLRAHAPFWSSLRIQISESLRLSLPSPKPKGKRASGGKRSPRQSTSAQS
PGQNPQHLEQSGLDGLTEDLLSLNLNTSTSSNTSPASVAIGGARRKVKPNPQRNSTGQES
NSPVKPMSEKARDGDSTHAEITAVKAETPDRSFPVTGNPAAMYDQESSGLEAACGETVTA
VIEVFGTQATDVDGMHVVNPLPWCPHLESVRPVPSGGIDVFLPCEECGGDAENWICLFCY
KVLCGRYVNQHMVTHGQVSGHPLVLSFADLSVWCYACESYVHNKVLHEAKNAAHLMKFGE
EIPPFN
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgttccagtttccaaaggttccactcgttctccaagaggaacaccagaaacc
aagaaagaaaacaacaacccaaaccataagaagagtctacaggacgcacggaggaagggg
agaatggatcggagcaaagtggaggaggagatgagcaatgaattacaaaacctggatgtg
cgtgggaagactaaagcagcaggaacaggtcttgtctacgtagatgccttcactcacttt
cactgcctctgggatgccagtcacccagagtgtccagcgagagtgagcactgtgatggag
acactggagacggagggtctgctgggacgctgtgtgcgagtagaggccagagctgtatca
gaagatgagctattactcgttcatacaaaggattatgtagagctgatgaaatccacacag
aaaatgactgaggaggagctgaagactctctcttataaatacgactctgtctacctgcat
cctgaatttttcacctccgcctgtatggcggtgggatcagtcctccagctggtggataaa
gtgatgacatcacagctgcgtaacggcttctctgtcaacaggcctccaggtcaccatgca
caggcagataagatgaatggctactgtatgtttaataatctggccatagcagcgcgctac
gctcaaaaacagcatggagttgaacgagttcttattgtggattgggacgtgcatcatgga
cagggaatccagtatatttttgaagaggatcccagtgtgctgtatttctcagtgcacaga
tatgaagatggctcgttctggccgcatctcaaggagtctgacagcagctcggtgggttca
ggagcaggacagggctacaatatcaacctgccctggaacaaggtggggatggaggatgga
gattacatcacagctttccagcagctcctcctgcctgtggcgtatgagtttcagcctcaa
ctggtgttagtggcagccggctttgactctgtgatcggtgacctaaagggtgagatgcga
gtgagtccacagtgtttctccatcctgacccatatgctgaaaggtgtagcacagggccga
ctcgtgctggctctggagggtgggtataacctccagtccacagcagagggtgtttgcgct
agtgtgaggtcactgctggatgacccttgccctcacctgacctctcctggtgctccgagt
gagagtgccctgaagtccatctcaaagaccatctctgccttgtatccattttggaagagt
cttcagacttttgaggggggtcctctgtccaatgccactcccctgcccgctccagtatgt
gcagaagtgaaggtttcctctccaatcactgggctagtttatgaccagagaatgatgcat
catcacaacatgtgggatggtcatcatccagagctccctcagagaatttcacggatcttc
acccaacacgaagagttgggcctgctgtcccgttgccatcggataccagctcgcttggca
acagaggaagagctggcactctgtcacagttctgagcacataagcactattaagagtaca
gagcacatgaaacccagagatctgcaccgactggggaacaattacaactccatctacatc
agtaacgagagctacacctgtgccctgatggccgctgggtcatgctttaactccgtacaa
gccatactcacaggccaggttagaaacggtgtggccatagtccgtcctcctggccatcat
gcagagaaagacacagcttgtggtttctgtttctttaatacggccgctttgactgcacgc
tatgcccagagcatcacacacaaatcgctgcgtgtcctcatcctcgactgggatgttcat
catggaaacggcacacagcacatctttgaggaagatgacagcatcctgtacatttctctg
catcgttatgaagacgggacatttttccccaactcggaggatgctaactatgataaggtg
ggtcaggggaaaggccgaggatacaatgtcaacatcccctggaatggaggaaagatggga
gacccagaatacatggcagctttccatcacttagtgatgccaatatccagagagtttgcc
ccagagctggtgctggtgtctgctgggtttgatgcggcacggggtgatccgttaggaggg
tatcaggtgacaccagagggctacgcccacttcacccatcagttgatgagtctggcagca
ggaagagtgctggtcatactggaggggggatataacctcacctccatctctgagtccatg
tccatgtgcaccagtatgttgctgggagactcccctccacctctagaacatctaccccct
cccaagaccagcgctgctgtcaccattaacaacgtcctgcgtgcacacgcccccttctgg
agctccctaagaatacagatttcagaatcacttcgtttgtctttgccatctcctaaaccg
aaaggcaagcgggcatcgggtggcaagagatcgcctcgccagtccacttctgctcagagt
cccggacagaacccgcagcatcttgagcagtccggccttgatgggctcactgaggatctg
ctttctctgaatctcaacacaagtacctcatctaacaccagcccagcatcagttgctatt
gggggagccagacggaaagtgaaacccaacccacagaggaattcaacaggccaggagtca
aattcacccgtaaaacccatgtcagagaaagccagagatggagacagcacacatgcagag
attactgctgtaaaagcagagacacctgaccggtcattcccagtcactggaaatccagct
gccatgtatgaccaggagagctctggtctggaggctgcttgtggtgagactgtgacggca
gtcatagaggtctttggaacacaagccacggatgtggacggcatgcatgtggtgaacccg
ttgccatggtgcccacacttggagtcggtgcgaccggtgccctcaggtggcattgacgtc
ttcctgccgtgtgaagagtgtggaggtgatgctgaaaactggatctgcctcttctgctac
aaggtgctctgcgggcgttatgtgaaccagcacatggtgacccacgggcaggtgtcgggt
caccctctggtactgagcttcgctgatctttctgtctggtgctacgcttgtgagtcatac
gtccacaacaaggtgctccatgaagccaaaaacgctgctcacctcatgaagtttggagag
gagattcctcctttcaactaa
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integrated database retrieval system
