Chanodichthys erythropterus (predatory carp): 137027072
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Entry
137027072 CDS
T10334
Symbol
smarcb1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03082
ATP-dependent chromatin remodeling
cery03250
Viral life cycle - HIV-1
Brite
Protein phosphatases and associated proteins [BR:
cery01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137027072 (smarcb1a)
Transcription machinery [BR:
cery03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137027072 (smarcb1a)
SWI/SNF complex
137027072 (smarcb1a)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137027072 (smarcb1a)
PBAF complex
137027072 (smarcb1a)
SWI/SNF complex
137027072 (smarcb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137027072
NCBI-ProteinID:
XP_067250967
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Position
9:17972595..17978356
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AA seq
387 aa
AA seq
DB search
MFSGTSRANVLWFNMALSKTYGQKPIKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPS
LSRRLATVEERKKIVASSHDHGYTTLATSVTLLKASEVEEIFEGHDEKYKAVSISTEPPA
YLREQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRLGRDKKRTFPLCFDDHDPAVIHE
NATQPEILVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIA
SAIRQQIESYPTDSILDEQMDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLC
SELGLGGEFVTTIAYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTD
AEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcggaacgagtcgcgctaatgttctatggttcaacatggctctaagcaaaaca
tacggacaaaaacctattaaattccaactggaagaggatggagaattttacatgattgga
tcagaggtgggaaattacctgcgtatgttcagagggtctttatataagcgctacccgtca
ctctcaagaagactagcgacagtagaggagagaaagaagatagtagcatcatctcacgat
cacggttacaccactttagccaccagtgtgacgctgctgaaggcctcagaagtagaagag
atatttgagggacatgacgagaagtacaaggctgtgtcaatcagcactgaacctccagcc
tatctcagggagcagaaagccaagagaaacagtcagtgggttcccactcttcccaacagt
tcccatcacttagatgctgtgccttgctccactacgattaaccgcaaccgactgggccgt
gacaaaaagaggacattccccctctgctttgatgatcacgaccctgctgtcattcatgag
aatgccacccagcctgagatcctggtgcccatccgactggacatggagattgacgggcaa
aaactgcgtgatgctttcacatggaacatgaatgaaaagctaatgactccagagatgttt
gctgaaatcctttgtgacgatctggacctgagcccactgacctttgttccagccattgcc
tcggccatcagacagcagatagagtcctaccccacagacagcatactggatgagcaaatg
gaccagagagtcatcatcaagttaaacatccatgttgggaacatatctctggtggaccag
tttgaatgggacatgtctgagaaggagaactctccggagaagtttgctctgaagctgtgc
tctgagctgggcctgggaggagagtttgtcaccactattgcatacagcatacgtggccag
ctcagctggcatcagaggacctacgctttcagtgagaaccctctccccacggtggagatt
gccatccgaaacacaggcgatgctgaccagtggtgtccactactggagacgctgacagat
gctgagatggagaaaaagatcagggaccaggacagaaacacaaggcggatgagacgactt
gcaaacacagccccagcatggtga
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