Chanodichthys erythropterus (predatory carp): 137027089
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Entry
137027089 CDS
T10334
Symbol
ptch1
Name
(RefSeq) protein patched homolog 1 isoform X1
KO
K06225
patched 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
137027089 (ptch1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
DcrB
Motif
Other DBs
NCBI-GeneID:
137027089
NCBI-ProteinID:
XP_067250999
LinkDB
All DBs
Position
9:complement(18444435..18514427)
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AA seq
1508 aa
AA seq
DB search
MASAVNVSSEQENRDPDRPRLTRRNRGNYRTAAADLEYLQRPSYCDAAFALEQISEGKAT
GRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLRAANLETDVEKLWVE
VGGRVNQELKYTRQKIGEEAMFSPQLMIQTPRQEGANILTVEALKQHLDSAIKASRVHVY
MYNRQWTLEHLCYKSGELITETNFVDQIIEKLHPCLIITPLDCFWEGAKLHSGTVYLPGK
PPVQWTNFDPMGFIAELKMLKYSVDIWEEMLVKADVGHGYMDRPCLNPSDPDCPLSAPNK
NMTRPFDVARVLTGGCYGLSKKYMHWQEELIVGGTKKNDSGKLLSAQALQTMFQLMTPKQ
MYEHLKGYDEVSHINWNEDKAAAILEAWQRRYSEAVQQSVTVNSSQKVLTFTTTTLEDIL
KSFSDVSVIRIASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLLVTLSVAAGLGLCSLL
GISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALT
SISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRFDIF
CCFVSPCANRVIHLEPQASYGDSSADSSRYSPPPSYSSHSFAQHTQITMQSTVQLRTEYD
PRTQAYYTTAEPHSHISVQPYAPNPNPNPNPNRNNNNNNNRNNSSTGPGAASDTASCQSP
DGASSTRDLLSQFGESSLRCLEPPCSRWTFASFAENHYAPFLLQPTTKVVVILLFLALLG
VSLYGTTRVRDGLELTDIVPRETGEYDFIRAQFRYFSFYNMYVVTQRADYAQIQPQLYEL
HQRFGTVKYVLREENGQLPHMWLHYFRDWLQGLQEAFDKDWQAGRITQGNYRNGSDDGVL
AYKLLVQTGRRDKPVDINLLTKQRLVGSDGIINPNAFYIYLSAWVSNDPVAYAASQANIR
PHPPEWLHDRTDSIPVSRLNIPAAEPIEYAQFPFYLNGLRETPQFVEAIESVRAICSNYS
RQGLPSYPNGYPFLFWEQYVGLRHWLLLSISVVLACTFLVCAVFLLNPWTAGIIVLVLSL
MTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDRNKRAVLALEHM
FAPVLDGAFSTLLGVLMLAGSEFDFIVRYFFAVLAILTVLGVLNGLVLLPVLLSYFGPYP
EVSPVDGRSRLPTPSPEPPPQVVRFTTRPSHTSPGAGSADSSDSEYGSNTTVSGISQELQ
QYDLQPNRGRSARLEEVQIATGGRQGSRQVELPMFPSHSVSRAFISLNVLHKNSELTMLQ
WFPQDDSRQQQPQRHYRSTHLPSSQDAGPQSSKRYCSRDPKRDLGSGHPPPPHRPRMDAF
ETATEPGGRSGPNHRERSGAHRPRSHNPYSHPSHPSTGPPYCQPITTVTASASVTVAVHS
GMPGQSPAYPSYPSNDSYHTSEDVYTDPHFSDPHVPFDESNDSSKAEGMELQDLEYDTPN
VCHTRPSS
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggctgttaatgtctcctccgagcaggaaaacagagaccccgatcggccgagg
ttaacgcggagaaataggggcaactatcggaccgccgcggcggatttggagtatttgcag
cggccgagctattgcgatgctgcctttgcattggagcagatatcagaggggaaggcgact
gggaggaaagcgccgctgtggttgagagcaaagtttcaaagacttttgtttaaacttggc
tgttacatacaaaagaactgcggaaagtttttagttgtgggccttttaatatttggagct
tttgctgttggactaagggcagctaatctggagacggacgtggagaaactctgggtagaa
gtgggtggcagggtgaatcaggaactcaagtacacacggcagaagatcggagaggaggcc
atgtttagtcctcagctcatgatacagacgccacgacaggaaggtgctaacattctgacc
gtagaggcgctgaagcagcacctcgactctgccataaaggccagcagagtgcacgtttac
atgtacaacaggcaatggacattggaacatttatgctacaaatcaggagaacttattaca
gaaaccaattttgtggaccagattatagagaaactgcacccatgtctgatcatcactcct
ctggactgcttctgggaaggtgctaagctacattcaggaacggtctacctccctggcaaa
cccccagtgcagtggaccaactttgatccgatgggattcattgctgagctgaagatgctg
aagtattcggtggacatctgggaggagatgctggtcaaagcagatgtgggccatggctac
atggaccgcccctgcctgaatccctcagaccctgactgtccattgtccgctcccaacaag
aacatgacacggccttttgacgtggctcgtgttctgactggtggctgctatgggctttcc
aaaaagtacatgcactggcaggaggagcttatcgtaggtgggaccaagaagaatgacagc
ggcaaacttctgagtgcacaggctcttcagaccatgttccaactcatgaccccaaagcag
atgtacgagcacttgaagggctacgacgaagtctcgcacatcaactggaacgaggacaaa
gcagctgccatattagaggcctggcagaggagatactctgaggccgtccagcagagtgtg
acggtaaattcgtctcagaaagttctcacgttcaccaccaccaccctggaagacatcctt
aagtccttctctgatgtcagcgtgatccgtatcgccagtggctacctcttaatgcttgcc
tatgcgtgtctgaccatgctgcggtgggactgcgccaagtctcagggggcggtcgggctg
gccggagtgttgctggtcactctttctgtcgccgctggactgggactctgctcgcttttg
ggcatctcctttaatgccgctaccacacaggtgttgccgttcctggcccttggtgtaggg
gtggacgatgtctttctcctggctcatgctttcagcgagactggtcagaacaagaggatt
ccattcgaggaccgcactggtgaatgtctgaagaggactggggctagtgtagccttgacc
tccatcagtaatgtcacagcatttttcatggctgcccttattccaatcccagcactccga
gctttctccttacaggctgcagtggttgtggtgtttaacttcgctatggtgctgctgatc
tttcctgccatcctcagcatggacctgtaccgccgagaggaccgccgctttgacattttc
tgctgctttgttagcccttgtgctaaccgggtgatccatttagagccgcaggcatcgtac
ggcgactcctccgccgactcgagccgctacagccctccgccctcctacagcagccacagc
tttgcccagcacacccaaatcaccatgcagtccactgtacagctgcgcaccgagtacgac
cccagaacacaagcctactacaccacagccgagccccattctcacatctccgtccaaccc
tatgccccaaatcccaatcccaatcccaaccccaaccgcaacaacaataacaacaacaac
cgcaacaacagcagcacagggccaggagcggcttctgatacagcgtcctgccagagtcct
gatggcgctagctccacacgagacttgctatctcagttcggggagtcgagtttacgctgc
ctggaaccaccgtgttcacgatggacattcgcatcatttgctgagaatcattatgcaccg
tttttactgcagcctacaacaaaggtggtggtaattttgctcttcttggcactactcggg
gtcagtctgtacggcaccacccgtgtccgggacggtttagagctgactgacattgttcct
agagagacgggcgaatacgacttcatccgtgcccaattccgctacttttccttctacaac
atgtatgtggttacccagagagcggactacgcacagatccagcctcagctctatgagctg
caccaacgcttcggcactgtgaagtacgtcctgcgggaggagaacggccagctcccacac
atgtggctgcattacttcagagattggctgcaaggtctgcaggaggcattcgataaggac
tggcaggccggtaggatcactcaggggaactacaggaacggctctgacgatggtgtcctg
gcctacaaactcctggtgcagactggccgcagggataagccagtcgacatcaacctgcta
accaaacagcggttggtgggtagcgatggaatcatcaacccaaacgccttctatatttat
ttatctgcctgggtgagcaatgacccggtggcctatgccgcatcccaggccaacatccgt
cctcaccctcctgagtggctccatgacaggacagactccattcctgtcagcagactcaac
attcctgctgctgagcccatcgaatatgcacagtttcccttctacctcaacgggcttcgt
gagacgccacagttcgtggaggccatcgagagtgtccgcgccatctgcagcaactacagc
cgtcagggcctgcccagctaccccaatggctaccccttcctcttctgggagcagtacgta
ggcctgcgtcactggctcctgctgtccatcagcgtcgtgttggcctgcacctttctagtg
tgcgccgtcttcctgctcaacccctggactgcgggaatcatagtgttggtgctgtctttg
atgacggtggagctgttcggcatgatgggattgatcggcatcaagctcagcgctgtgcct
gtcgtcatcctcatcgcttctgttggcataggtgtggagttcaccgtccacgtggcactg
gcgttcctcacagctatcggggacaggaacaaaagagctgtactagcgcttgagcacatg
tttgccccagtgttggatggagcgttttccacactattaggagtcttgatgctggcaggg
tcagagtttgacttcatagtcaggtatttctttgctgttttggccatcctaacagtatta
ggggtcctgaatggactggtgctgctcccagtcttgttgtcttactttggcccttatcct
gaggtatctccagtggatggacgaagccggctgcccaccccgtctcccgaacctccccca
caggtggtccgcttcaccacgcggcccagtcacacgtcccctggagcaggttcagcagac
tcatcagactcagaatacggttccaacactactgtgtctggcattagccaagagcttcag
caatatgacctccagcccaacagggggcgatcagccagactggaggaggtacagattgcc
actggggggcgacaaggcagtcgtcaagttgaactgccaatgtttccttctcactcagtg
agtagagcatttatatctctaaatgttttacataaaaacagtgaactaacaatgttacaa
tggtttccacaggatgactctagacagcagcaaccacagcggcattacaggtctacccat
cttcccagttctcaggatgctggacctcagtcgtcaaagcgatactgtagcagggaccct
aagagggacctcgggagcggacacccgcctccccctcacaggccgcgcatggatgctttt
gaaaccgctactgagccaggtggccgttcgggccccaaccaccgggaacgttcaggggcc
catcgcccccgttcccacaacccctactctcacccttcccatccgtccacaggccctccc
tactgtcagcccatcacaacggtgacggcctcagcctcggtgacggtcgccgttcattcg
gggatgcccggacagagccctgcctacccgtcctacccctccaatgacagctatcacact
tcagaagatgtctacactgaccctcacttttccgaccctcacgtgccctttgacgagagc
aacgacagctcaaaagcggagggcatggagctgcaggatctagaatatgacactcccaat
gtctgccacacaagaccctccagctga
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integrated database retrieval system
