Chanodichthys erythropterus (predatory carp): 137027177
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Entry
137027177 CDS
T10334
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137027177 (gapvd1)
Membrane trafficking [BR:
cery04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
137027177 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
137027177
NCBI-ProteinID:
XP_067251180
LinkDB
All DBs
Position
9:complement(23489122..23542330)
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AA seq
1473 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNNEVLKTAERLYRAAWIAKQQRINLDRLIL
TSVEASPAECCQHAKFLEDTQFVDGYKTLGFQESIYGEFLGRLRENPRLVASCLVAGERL
NHEHTQGVIHTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKLIERFTPAQQERLFGEKGT
DEYRRKVQAGVEANEAKLVALVNTFIGYLKQNTYCFPQSLRWIVSQMYKTLARVERLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMSDADDGD
PRRKSSLSKFDKTCVSAFLDVVIGGRAVETPPMSTMNLLEGLTRTVVYMTHNQLLALVDF
VRSVTAGDQLREEDHLALETLLANVPQSRTTKSNSLELTPSNTPQLSPATTPANKKNRLP
IGQQLAAITCWEPSATALSAHIPLVTPFGSRSRSRSNMAQEGEIEASSQESLQEVTPEEV
LVISFGTSPQTVPGMMSENEVLTLNLGDGGHGDAPVDDNKLHGKPDKTLRFSLCSDNLEG
ISEGPSNRSNSVSSLDLEVESVSEGGPGPSGSNGAEALQLLEHEQATTQDNLDDKLRKFE
IRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAENALGGMLCLPVLL
DPYGSTISETTSEAWSVEVLPSDSEAADLKQEERLQELESCSGVGSTSDDTEVREVSSRP
STPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEDSAHGAHSLSCAPSQ
TDSLLAMFDPLSSGEGSCTGTIVRPKVHYPRPPHPPPDPPIPEASIMSHQEPRPPLFAPH
LAQGDLEHPKQRHSYPERLVRSRSTDVVSAGRRPNSDPGLNRRTMLEEREPAGAFSTGPT
SSPSKDSLKGESEDRKDSDDEKSDRNRPWWKKRFVPAIPKVPIAGLRKRDKPEKDEQGAE
RVPQDEPSMLRQSSKTQSAEAIMDKYIRYMEKRPAPSDGAVSGTYIGQEPCREGDSEHDS
PKDEVLQNISADDLPDSASQTAPPQDKTFSFSDIKKKLRMALCAADSVVFPIIPPATTRN
GLPDHADPEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSHLDPRTCRKLLTAMAE
DYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVRLLLEHMESKM
LDFIKAFQGCTAADDKTAAVEDFLRYLYGAMAHDAIWQYASEEQLQDAQMAIERSVMNRI
FKLAFYPNQDGDIHRDELFHEHIQRLSKVVTANHKALQIPEVYLKEAPWPSAQAEIRTIN
AYKTPRDKVQCILRMCSTIMNLLSLANEDAVPGADDFVPVLVFVLIKANPPCLLSTIQYI
NNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacattcacactctggcccaccacctgaagcaggaacgtctgtatgtg
gcatcagagaagcagctcatccagcggctcaacaacgaagtgctaaagacggcagagagg
ctctaccgtgcagcctggatcgccaaacaacaaaggatcaacctcgatcgcctcatccta
accagtgtggaggcctctcctgcggaatgctgccagcatgccaagtttctggaagataca
cagtttgtggatggttataagacactaggttttcaggagagcatctacggggagttctta
ggccggttgagggagaacccgcgattggtggcgtcctgtttggtggcaggagagagactc
aatcatgagcacacgcaaggggtcatacacacagtcttcacctcactctatggcaactgc
atcatgcaagaggatgaaagctacctgttgcaggtgctgcgttatttggtggaatttgaa
ctaaaggagagtgacaaccctcgtcgcctgttacggcgaggtacatgtgccttcagcatc
ctcttcaaactcttctccgagggcctgtattcagctaagcttttcctcactgcaaccctc
cacgagcccatcatgcaactgctggttgaggatgaggaccatctagagacagatccagcc
aaactcatagagcgctttaccccagcccagcaggagcgcctgtttggggagaaaggcaca
gatgagtaccgcagaaaagttcaagcaggggtggaggccaatgaggccaagctcgtggcc
ctggtcaacacctttattggctacctgaagcagaacacctattgcttcccacagagtctg
cgttggattgtgtctcagatgtataagacgctggcacgggtggagaggttagaggttggg
gaggtgaggacgatgtgcaccgacttgctgctcacttgcttcatctgtccagcaattgtc
aaccctgaacagtacggcatcatctcagatgcacccatcaatgaggtggctcgtttcaac
ctcatgcaggtggggcagttattgcagcagttagccatgtctgatgcagatgatggagat
cctcgacgcaaaagcagtttatcaaagtttgataagacatgtgtctctgcctttttggat
gtcgtcattggtggaagagctgtcgagactccacccatgtcgacaatgaatttacttgag
ggcctcacgcgtacggtggtttacatgactcataatcagcttttagctctggtggacttt
gtgcgtagtgtcactgcaggcgatcagctcagagaagaagaccacctggctctggaaacc
ctactagccaatgtacctcagtcccgcacaacaaagagcaatagcctggagctcacgccc
tctaacacgccccagctttccccagctaccacacccgccaacaagaagaacagactccct
attggacaacagttggcagccataacgtgttgggagccctctgccactgccctgtccgct
catatacccttagtaaccccatttggctctcgcagccgaagccgatccaacatggctcag
gagggtgagattgaagctagctcccaagagtctctgcaggaggtcacgcccgaggaagtg
ctagtcatctcgttcggaacctcaccacagaccgtacctgggatgatgtcagaaaatgag
gttctgactctgaatcttggagatggtggacatggagatgcccctgtcgacgacaataaa
ctgcatggcaagcctgataaaacgctgcgattctcactttgcagtgacaacctggagggc
atttctgagggcccgtctaaccgctccaattcagtttcttctttggacttggaggtggag
tctgtgtcagaaggtggaccaggtccatctggtagtaatggtgcagaggctttgcagcta
ctggaacatgaacaagccactacacaggacaatttggatgataaactgcgtaagtttgag
attagggacatgatgggcctgacagatgatcgagacatttctgagacggtcagtgagact
tggagcactgacgtcctgggcagtgacttcgatcccaacatggatgaggaccgactgcag
gagatagcaggggcggcggagaatgcattgggcggcatgctgtgtttgccagtgcttctg
gacccgtacggttctaccatctctgagacaacgagtgaggcatggagcgttgaggttctg
ccaagtgactcagaagctgcagacctgaagcaggaggaacgcttgcaggagctggagagc
tgctcgggtgtgggtagcacttcagatgacaccgaggtcagagaggtcagctctcgaccc
agcaccccgggactcagcgttgtgtcaggcatcagtgccacgtctgaggacatccccaat
aagattgaagacctacgctcagagtgcagctcagattttggaggcaaagactccgtgacc
agtccagatggagaggactctgctcatggagctcacagtctatcctgtgcaccctctcaa
acagattcactgctggccatgtttgatcccctctcctctggagaaggttcatgcactggc
accatcgtgcggcccaaggtgcactatccccgaccccctcaccctccccctgacccaccc
attccagaggccagcataatgagccaccaggagcctcgcccacccctcttcgccccccac
ctggcacagggtgacctggagcatcccaagcagaggcactcttatcctgaaaggctggtg
agaagccgcagcacagatgtggtgtccgctggacgcagacccaacagtgatcccggactg
aaccgcaggaccatgttggaggagagagaaccggctggggccttctccacagggcccacc
tcttctcccagcaaggattccctcaaaggagagtctgaggacagaaaggacagtgatgat
gagaagtctgacaggaacagaccctggtggaagaagcgctttgttcctgccattcctaaa
gtgccgatcgcggggctccgaaagcgggataagccagaaaaagatgagcaaggagcagag
agggtcccgcaagatgaaccttcaatgctcagacagagctctaagacccagtcagcagag
gcaataatggacaaatacatcaggtacatggagaaacgacccgcccccagtgatggagca
gtttctggaacctatattggacaagagccctgtagagaaggagacagtgagcatgactct
cctaaagatgaagttctgcagaacatctctgcagatgaccttccagactctgccagtcag
acagcaccacctcaggacaagacgttctccttcagtgatattaagaaaaagctacgcatg
gctctgtgcgctgcagattcggttgtatttcccatcattccacctgctacaacacgtaat
ggcctcccggaccatgcagatcccgaagacaacgagatcgtgtgctttctgaaggtgcag
ctggcggaggccattaacctgcaggataagaaccagatggctcagatccaggagactacg
cgctgcgtcagccacctcgacccccgcacctgcagaaaactgctcactgccatggcagag
gactacaggaagcgggctccgtacatcgcctatctgacgcggtgtcggcaaggtctgcag
acgtctcaggctcatctggagcgactcctgcagagagtgttgagagataaagaagtggcc
aaccgctactttaccaccgtctgcgtccgactgctgctggaacacatggagtctaagatg
cttgacttcatcaaagcatttcagggctgcacagcagctgacgataagacagcagccgtg
gaggatttcctgcgttacctgtatggagccatggcccatgatgccatctggcagtatgcc
agtgaggagcagctccaggatgcccagatggccatcgaacgcagcgtcatgaaccgcatc
ttcaaactggcattctaccccaatcaggatggggacatccacagagacgagctattccac
gagcacattcagcgtctttctaaagtggtgacggcaaatcacaaagctctgcagatcccg
gaggtgtatctgaaggaagcaccgtggccctcagcacaagctgagatcaggaccatcaat
gcctataagaccccacgagataaggtgcagtgtatcctgcgcatgtgctccaccattatg
aacctgctcagcctggccaatgaggacgctgtacccggggcggacgactttgtccctgtg
ctcgtctttgtcctgattaaggcaaacccaccctgccttctgtccaccattcagtacatc
aataatttctacgccagcaggctgagcggggaggagtgctattggtggatgcagttcact
gccgccgtggaattcattaaaaccatcgacgatcgcaagtga
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