Chanodichthys erythropterus (predatory carp): 137027266
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Entry
137027266 CDS
T10334
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cery03041
]
137027266 (rbm39b)
Spliceosome [BR:
cery03041
]
Common components
Common spliceosomal components
General mRNP proteins
137027266 (rbm39b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
PRP38_assoc
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
137027266
NCBI-ProteinID:
XP_067251349
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Position
9:complement(28825239..28843310)
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AA seq
525 aa
AA seq
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MADDFDVEAMLEAPYKKGESKSSSANGHNEERSKKKRRSNSRSPSPGRRRSRSGGRKKSR
ERRRSRSRERRRSRSKERKRSRSRSKDRGGRYRGRKSPFMGPKLNGGPGGKTGPQHFTKH
SRRRSRSKSPFKKDKSPVRQPIDNLSPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVR
DVRMISDRNSRRSKGIAYIEFVEATSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAS
MLQRGGAGPMRLYVGSLHFNITEDMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFAD
AECAKKALEQLNGFELAGRPMKVGHVTERSDASSASSFLDNDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPAAAKQALQMSGSVAFGNLANASAAPPLIPNPGMNQAMNLPTQPLATHC
LQLSNMFSPQTENEPGWDMEIRDDVIEECKKHGGVVHIYVDKNSAQGNVYVKCPTIPVAM
AVVSALHGRWFAGKMITAAYVPLPTYHNLFPDAATATELLRPMHR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacttcgatgttgaggccatgctggaagctccttataagaagggtgaaagc
aagtcttctagcgccaatggtcataatgaggaacgcagcaaaaagaaaagacgcagcaac
agtcgtagtccgagtccaggccgtcggaggagtagaagtggagggcgcaagaagagccga
gaacgacgcaggagccgcagccgtgagcgaagacgttcacgaagcaaagagcgcaaacgt
tcaagatcccgcagcaaggatcgtggtggacgttatcgtggacgcaaaagcccctttatg
gggccgaaattaaatggtggtcccggagggaagaccggcccacaacatttcaccaaacac
agtcgcaggcgctctcggagcaaaagcccgtttaagaaggacaaaagccccgtcaggcaa
ccgatagataatctaagcccagaagagagagatgcccgtacagtgttctgcatgcagctc
gctgccagaattagacccagagatctggaagaattcttctctgcagtgggaaaagtccgt
gatgtgaggatgatctcagatagaaactctcggaggtcaaagggcattgcctacattgag
tttgtggaggccacatcagtaccattggcaatcggcctgacggggcagagagttctggga
gtccctatcatagtccaggcctctcaggctgaaaagaacagggccgcagccatggccagc
atgcttcagagaggtggtgcagggcccatgcggctgtacgtcggctccctgcacttcaat
ataactgaggacatgctcaggggcatttttgagccgtttggaaagattgagggcatccag
ctaatgatggacagtgagacgggcaggtcgaaaggatatggctttatatcatttgcagat
gcagaatgtgctaaaaaagccctggagcagctaaatggttttgagcttgcggggcggcca
atgaaggtgggtcatgttaccgagcgttcggatgcctcatcggccagctccttcttggac
aatgatgagctggagagaactggcattgacttgggcacgacgggtcgccttcagctgatg
gcaagactcgcagaaggcacaggactgcagattcctgcagctgccaagcaggctttacag
atgagtggttctgtggcgtttggaaatctggcaaatgcctcagccgcacctcctcttatt
cccaatcctgggatgaaccaagctatgaaccttccaacccagcctctggccacacactgt
ttacagctctccaacatgttcagtccacagacggaaaacgaacctggctgggacatggag
atacgggatgatgtcatcgaggagtgcaaaaaacatggaggagttgttcacatatacgtc
gacaagaactctgctcaaggaaatgtttatgtaaaatgtccaaccatcccagtagcaatg
gctgttgtcagcgctctgcacgggcggtggtttgcaggtaaaatgatcacagctgcctac
gtgcccctccctacataccataacctgtttccagacgctgccacagccacggagctcctg
aggcccatgcaccggtga
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