Chanodichthys erythropterus (predatory carp): 137027303
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Entry
137027303 CDS
T10334
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137027303 (ybx1)
03019 Messenger RNA biogenesis [BR:
cery03019
]
137027303 (ybx1)
03041 Spliceosome [BR:
cery03041
]
137027303 (ybx1)
Transcription factors [BR:
cery03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
137027303 (ybx1)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
137027303 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
137027303 (ybx1)
Spliceosome [BR:
cery03041
]
Common components
Common spliceosomal components
General mRNP proteins
137027303 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
137027303
NCBI-ProteinID:
XP_067251439
LinkDB
All DBs
Position
9:complement(32143789..32150763)
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AA seq
314 aa
AA seq
DB search
MSSEAETQQPPQPAADVESPSSPAAAATAGDKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA
DRNRYRRYPRRRAPPRDYQENYQSDGEGEVREKREGGENPPEGEMQQQQRRPTYPGRRRY
PPYFVRRRYGRRPPYSNTPQRGDMTEGGEVDESQGGPDQGNKPMRQNYYRGFRPRFRPRG
PPRPRPVREGEEDKENQSESGQNQEPRQRRYRRNFNYRRRRPQTTKPQDGKDSKAADASA
DKSAAPEAEQGGAD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgaggccgaaacacagcagccgccgcagcctgccgccgacgtggagagcccg
tccagcccggcagccgcagctaccgcgggggataagaaggtcatcgcaacaaaagtcctg
gggacagttaaatggttcaatgtaaggaatggctacggtttcatcaacaggaatgacaca
aaggaagatgtctttgttcaccagactgccattaagaagaacaacccaaggaaatatctt
cgtagcgttggggatggagagactgtggagtttgacgtcgtagaaggggagaagggtgcc
gaagcagccaatgttaccggcccgggtggcgtccctgtgcaaggtagcaagtatgcggct
gacaggaaccgatacaggcggtacccacgcaggagggccccccctcgcgactaccaggaa
aactatcagagtgacggtgagggagaggtacgggagaagagagaagggggagaaaacccc
cccgagggtgagatgcagcaacagcagcgtagacccacctaccccggcagacggcgctac
ccaccatactttgtgcggagacgttatggcagacgccctccctactccaacacaccccag
agaggggacatgacagagggtggggaagttgatgagagccaaggtggtccagaccaaggc
aacaaaccaatgaggcagaactactacagaggcttccgaccaaggttcagaccaaggggt
cccccacgtccccggccagtgcgggaaggggaggaggataaggagaaccagagcgagagt
ggccagaaccaggaaccccgtcagcgccgctaccgccgcaacttcaactaccgccgcaga
cggccccagacaaccaagcctcaggacggcaaggacagcaaggcagccgatgcatcagcc
gacaaatcagccgctcccgaagccgaacagggcggagcagattaa
DBGET
integrated database retrieval system
