Chanodichthys erythropterus (predatory carp): 137027592
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Entry
137027592 CDS
T10334
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cery04121
]
137027592 (rnf13)
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137027592 (rnf13)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137027592 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf_RING_Vps8
zf-ANAPC11
DUF7027
STAC2_u1
Prok-RING_4
zf_RING_Vps8_fungal
Hemotin
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
137027592
NCBI-ProteinID:
XP_067251903
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All DBs
Position
10:1865694..1891476
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AA seq
377 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQIFAFLNLLPVEADISAYSFDNKTENFDDLPARFGYRLP
SEGLKGFLIGAHPENACVPIDPPPLRDNLTSAFIVLIKRFDCNFDIKVLHAQKAGYKAAI
VHNVDSDDLISMGSNDLDILKQIDIPSVFIGEEAANSLKEDYIYEKGGHVILMPDFSLPL
EYYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKFKKGDSYDVC
AICLDEYEEGDKLRVLPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSDGDSDSESDSGD
SGGEENDVSENTPLLRSLASTSAHSFGTMSGSPSQHEVESSDYDEHSDTTDSEEEVTVET
VVVQLQQGRPDNIEANA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctctttggggatgctgatgctctctgccacacagatttacaccatattcacg
gttcagatatttgccttcctcaatcttctgcccgtggaggctgatatatcagcttattca
ttcgacaataaaacagagaactttgatgacctacctgctagatttggctacaggctgccc
agtgaaggactgaagggcttcctgatcggtgcccatcctgagaatgcctgtgtgccgatc
gatcctccaccgctgagggacaacctcaccagcgccttcatcgtgctgatcaagcgcttc
gactgtaactttgacatcaaggtcctccatgcgcagaaggcaggctacaaggcagcgatt
gtccacaatgtggactctgatgacttaatcagcatgggatccaatgatctggatattctg
aagcagatagacattccttcagtgtttattggtgaagaagcggccaactctctcaaagag
gattacatctatgagaaaggtggtcatgtgattctcatgccagacttcagtttgcctctg
gaatattacctgatcccattcctcatcatcgttggaatctgcctcatccttattgtagtt
ttcatgatcacaaagttcgtacaggacagacatagagccaggagaagtcgcttacgcaag
gaccagctgaagaaactccccattcacaagtttaagaaaggtgattcctatgatgtttgt
gccatttgtttggatgagtatgaagaaggagacaagcttcgggtcctgccctgctcacat
gcctatcactgcaagtgtgttgacccatggctgaccaaaaccaagaagacctgtccggtg
tgcaagcagaaagttgtgccgtccgatggcgactcagattctgaatctgattctggtgac
agcggcggcgaggagaacgatgtttcggaaaacacgcccctgctgcgatctctggcctct
actagcgcccattcctttggcaccatgtccggctcgccgtcccagcatgaagtggagtca
tcggactatgacgagcacagtgatactaccgatagcgaggaagaggtcacagtggaaact
gttgttgtacagctgcagcaggggcgtccggacaacattgaggccaacgcctaa
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