Chanodichthys erythropterus (predatory carp): 137027604
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Entry
137027604 CDS
T10334
Symbol
fxr1
Name
(RefSeq) RNA-binding protein FXR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137027604 (fxr1)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
137027604 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
137027604 (fxr1)
mRNA cycle factors
Stress granule specific factors
137027604 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
KH_1
Agenet
FXR_C3
KH_2
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
137027604
NCBI-ProteinID:
XP_067251932
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All DBs
Position
10:3849793..3862399
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AA seq
665 aa
AA seq
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MEELTVEVRGSNGAYYKGFVKDVHDDSLSISFENNWQPERQVPFNDVRLPPPADGKKEIT
EGEEVEIYSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNRNKA
VTKNTFSKCTVPVPDDLSAACENEHAHKDFKKAVGAIRIVYSPEQSELIVLSMNEATVKR
VSLLSDMHLRSIRTKLMLMSRNEEATKHLECTKQLASAFQEEFTVREDLMGLAIGSHGSN
IQQARKVPGVTAIELDEETRTFRIYGESAEAVQKARNYLEFLEDSVQIPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDNKLPRQEGMVPFTFVGTKESISNVQVLLEYHIAYLNE
VEQLRLERLQIDEQLRQIGMGYRPAPNRPADKDESTSNTTLHVNRSYSGRGRGRRGPGYT
SGYGTNSEQSYASETDSERKEELSDWSLAGEEPERNLRQQRDSRRRPGEGRGRGRGGPGG
RGRGSGRGASNSISSVLKDPDGNPYSLLDNTETDQTADTDASDSQMNTNRRRRSRRRRTD
EDTTVMDGMSESDNASLSENGLDDTEAKPQRRNRSRRRRFRPPEERQPVTVADYISRAES
QSRQRNPRDLRKNKKDMGQVEFISEHSPTEAVSNGPTKADDQSKTPQASAEKAPKAKPAV
VNGVS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattgacggtggaggtccgtggctccaatggagcttattataagggctttgtc
aaagacgttcatgatgactctctctccatttcatttgaaaataactggcaacctgaaaga
caagtccccttcaatgatgtgcgattaccacctcctgctgatggcaaaaaggaaatcact
gaaggagaagaagtggagatttactccagagcaaatgagcaagagccctgtggctggtgg
ctagctaaagtgcgcatgatgaaaggagatttctatgtgattgagtacgccgcatgtgac
gcaacctacaacgaaatagtaacatttgaacgtctccgcccagtcaaccgcaataaagct
gtgacaaagaacacattctctaagtgtaccgttcctgtcccagatgatctcagtgcagca
tgtgagaatgaacatgcccacaaggatttcaaaaaggcggttggagccattcggattgtt
tacagcccagagcaaagtgaactgattgtactgtccatgaatgaagccaccgtcaagcgc
gtctccctgctgagtgacatgcatttacggagcatccgcacaaaactcatgctcatgtcc
aggaacgaggaggccacaaaacatttagagtgcacaaagcagttggcctcagcgttccaa
gaggagttcactgtgagagaagatctcatgggtctcgccatcggaagccacggcagtaac
attcagcaagccagaaaggtgccgggagtgactgctattgaactagatgaggagactaga
accttcaggatttacggagagagtgcagaggcggttcagaaagcaagaaattatctagag
tttctggaagattcggtgcagattcctcgtaatcttgttgggaaggttattggaaaaaat
ggcaaggtcatccaggagattgttgataaatccggtgtggtgagagtgcgcatcgaaggc
gacaatgacaacaaactcccccgacaggaaggaatggtgccatttacatttgttggaacg
aaggagagtatcagcaatgtgcaggtcctactggaataccatattgcttacctaaatgag
gtcgaacagctgcgactggagcggctgcagattgacgagcagctgcgtcagattgggatg
ggttacaggcctgccccaaaccgacccgccgataaggacgagagcacatctaacaccacc
ctccatgtcaatcgctcctactccgggaggggccgcggccgccggggtcccggatacacg
tctggctatggcactaactcggagcagtcgtacgcttctgagaccgactctgagcgcaag
gaagagctgagcgactggtccctggcaggagaggagcccgagcgcaacctcagacagcag
agagacagcaggaggagaccgggagaaggccggggccgaggacgtggaggacctggtggc
agaggccgtggctcaggacgtggagcgtccaactccattagctcagtcctgaaagatcca
gatggaaacccatacagtctgttggacaacactgagactgatcagacagcagacacagat
gccagtgactcccagatgaacaccaaccgccgcagacgctcccgtcgccgccgcacagat
gaagacaccacagtgatggatggcatgagtgagtccgacaacgcctccctcagcgagaat
ggcctcgatgacactgaagctaaaccacagcggcgcaatcgtagccgccgccgccgtttc
cgccctcctgaggagaggcagccagttactgtggctgactatatatcaagagctgaatct
caaagcagacagagaaacccaagagacctgaggaagaacaaaaaggatatgggtcaagtg
gagttcatatcggagcacagccctactgaagctgtgagcaatggccccaccaaagcagac
gatcagagcaagacaccacaagcttccgccgagaaggcgccaaaagccaagccagctgtt
gtcaacggagtctcctaa
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