KEGG   Chanodichthys erythropterus (predatory carp): 137028159
Entry
137028159         CDS       T10334                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
cery  Chanodichthys erythropterus (predatory carp)
Pathway
cery03013  Nucleocytoplasmic transport
cery03015  mRNA surveillance pathway
cery03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cery00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137028159 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    137028159 (rbm8a)
   03015 mRNA surveillance pathway
    137028159 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cery03019]
    137028159 (rbm8a)
   03041 Spliceosome [BR:cery03041]
    137028159 (rbm8a)
Messenger RNA biogenesis [BR:cery03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     137028159 (rbm8a)
Spliceosome [BR:cery03041]
 Complex C
  Other components
   EJC/TREX
    137028159 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 137028159
NCBI-ProteinID: XP_067253031
LinkDB
Position
2:34716385..34722440
AA seq 187 aa
MLATHSRSLTSSIMADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGAR
SRVREDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDVHDKFAEFGEIKNLHLNLD
RRTGYLKGYALVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKSKRRGGRRRSR
SPDRRRR
NT seq 564 nt   +upstreamnt  +downstreamnt
atgctcgcgacgcattctcgttcactcacaagcagcatcatggcggacgtactggatctt
catgaagcggggggtgaagactttcctatggacgaggatggcgacgagagcattcacaag
ttaaaagagaaagccaagaagaggaagggtcgtgggtttggatcagaggaaggagcaaga
tccagagtcagagaggactatgacacagtagaacaggatggagatgagcctggccctcag
agatctgttgaaggatggattctgtttgtgactggtgtacatgaggaggcgacagaagag
gatgtccatgacaagtttgcagagtttggagaaatcaagaacctgcatttaaatttggac
agaagaactggttaccttaagggctatgcactggtggagtacgagacttacaaagaagcc
caggctgcgatggaagggctgaatggacaagatcttatggggcaaccaatcagtgttgac
tggtgctttgtaaggggaccgccgaagagcaagaggaggggtggaaggaggcgcagcagg
agccccgacagacggagacgctga

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