Chanodichthys erythropterus (predatory carp): 137028422
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Entry
137028422 CDS
T10334
Symbol
ssu72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137028422 (ssu72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cery03021
]
137028422 (ssu72)
03019 Messenger RNA biogenesis [BR:
cery03019
]
137028422 (ssu72)
Enzymes [BR:
cery01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
137028422 (ssu72)
Transcription machinery [BR:
cery03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
137028422 (ssu72)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137028422 (ssu72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssu72
Motif
Other DBs
NCBI-GeneID:
137028422
NCBI-ProteinID:
XP_067253283
LinkDB
All DBs
Position
10:28637151..28644344
Genome browser
AA seq
194 aa
AA seq
DB search
MPAHPLRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGTHVKLPGPAPDKPNIYDFKTT
YEQMYNDLVRKDKELYTQNGILHMLDRNKRIKTRPERFQSCKDQFDLVITCEERVYDQVL
EDLNSREQETFQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTDDMENEIDELLQEFE
DKSHRPFLHTVCFY
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgccggcccatccgctgcgtgtcgcggtcgtgtgctccagcaaccagaaccgcagcatg
gaagcgcacaacatcctgagcaagcgaggctttgatgtgcgttccttcggcacgggaacc
catgtgaaactcccgggacccgctccggacaaacccaacatttacgacttcaaaaccact
tatgagcagatgtacaacgacttggtccgtaaagacaaggaactatacacacagaatggc
atcttacacatgttagaccgcaacaagcgcattaagacacggcccgagcgcttccagagc
tgcaaagaccagtttgacctggtcatcacctgcgaggagcgcgtgtacgaccaggtgctg
gaggacctgaactcgcgcgagcaggagacctttcagccggtgcacgtcatcaacgtggac
attcaggacaaccacgaggaggccacgctgggagccttcctcatctgtgaactgtgccag
tgtattcagcacactgacgacatggagaacgagatcgatgaacttctgcaggagtttgag
gacaaaagccacagaccgttccttcacaccgtctgcttctactga
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