Chanodichthys erythropterus (predatory carp): 137028656
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Entry
137028656 CDS
T10334
Symbol
smg8
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8 isoform X1
KO
K18734
protein SMG8
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137028656 (smg8)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
137028656 (smg8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
DUF2794
Motif
Other DBs
NCBI-GeneID:
137028656
NCBI-ProteinID:
XP_067253813
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All DBs
Position
10
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AA seq
940 aa
AA seq
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MYPLHQDSYFALSSTQATPTCFKMAVPMNIGALLQSEIIEDTGDKDEGVCVLGIFGKSAM
QPGSAKDSLINTLADKHIFSLFGNDDTDSPGGGTSMQAYYNQENRVLYLVLTSVLDNRQL
IRACESLTVGLGHAEAHEFWKTAEKDHCLQLLYLFSLCHVLLLVHPTCSFDVTYDRMFRA
LDALRQKALPLLRAAIKDSPISKEWKLNCRPCPPRLLFVFQMNGALRVGSSGMGGNGTDG
SGGDKPKKHSPRRRLQHALEDQIYRIFRKSRVLTNQSSNCLFTVPANQAFVYVVPGPDED
PISSLLGHLRSNCVLRENEGGPPVPGQRRYQQMRHSNRQPSFNVESSLSSGGQLVDCTLK
EFLWQHVELVLTKKGFDDSVGRNPQPSHFELPTYSKWVHVAYRLYQVMIENSEDDAAEIS
LKVQGQLKVLEGFLDADAKFSENRCQKALPLAHSAYQSNLPHNYTTTVHKNQLAQALRVY
SQHARGVAFQRYALQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHLLPKPGEKPEMDHN
PPILYHNSRGRSTSSCNCGKKQSPREDPFDIQAANYDFYQMLEEKCCGKLERINFPVFQA
STPDPAPASDEVPRPVEVPPSGEADRLKEKETSTHTPGESTSLSLALSLGQSTDSLGTYG
DGAEGQEKRPSLVDRQPSTVEYLPGMLHSGCPKGLLPKFSSWSLVKLGPAKAYNSLTGLE
QPGFLPGSAFLLPWDVVIRSRSEEDVGSLEPLDGGPASWPAPNKASAGKRGSAGGIGRGR
RRDDVARAFVGFEYEDSRGRRFFSSGPDKVVKVLGQGGPKEPATRCLNSDMPLYIHSPAQ
GRGIKPHYAQLARLFVVVPDAPLEIVLNPQVQPGPPPCPIFHPEQPEVVLPPDGLWVLRF
PYAYVTDRGPCYPPKENQPLANFRVLRGVLRANTASSTPQ
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgctccaccaggactcttattttgcgctgagttcaacacaagccacgcccact
tgtttcaaaatggcggtgcccatgaatattggagcactgttgcagtcagaaataatagaa
gacaccggcgacaaagatgagggcgtttgcgtattgggcatatttgggaaaagcgcaatg
caacccggatcagccaaagattctctcataaacaccttagcagataaacacatcttctct
ctctttgggaacgacgacactgacagtccaggcggaggaacatcgatgcaagcatattat
aatcaggagaaccgcgtgctgtatctcgtattaacatctgttttagacaaccgccagctt
attcgcgcgtgcgagtcgctgacggtcggtttgggtcatgcagaagcgcatgagttttgg
aaaacggcagagaaggaccactgtttgcagcttctgtatctcttctcgctatgccatgtt
cttctgctggttcatcccacatgttcgttcgacgtcacttacgatagaatgtttcgcgct
ttggacgcgctacgtcagaaagcgcttccactgctgcgcgctgcgattaaagattcaccc
atatcaaaggaatggaagttaaactgccggccgtgccctccacgtctgctatttgtgttc
cagatgaacggagctctcagagtgggctcctctggcatgggtgggaatgggactgatggt
tctggaggggataaacccaaaaaacactcccctagaaggcggctgcagcatgctctggaa
gatcagatatacaggatattcaggaaaagtcgtgtactgaccaaccagagtagtaattgt
ctctttacagttccagccaaccaggcttttgtatatgtagtgccaggaccagacgaggac
cctatcagctctctgctgggtcacctgcggtccaactgtgtcctcagagagaacgaaggc
ggtccacctgtgcccgggcaaaggcggtaccaacagatgaggcactctaacagacagccc
tctttcaatgtggaaagcagtctttcctcaggagggcagttggtggactgcactttaaaa
gagttcctttggcagcatgtcgaacttgtattgaccaagaaaggttttgatgacagtgta
ggtcgcaatccacagccatcccactttgagctgcccacttattccaagtgggtgcatgtt
gcgtacagactttatcaggtcatgattgagaacagtgaggatgatgcagctgagatctcc
ctcaaggtgcagggtcagctgaaagtgctggaggggtttcttgacgcagatgcgaagttc
tcggaaaacaggtgtcagaaagcattgcccctggctcacagtgcgtaccagtcaaacctt
cctcataattacaccaccacagtgcacaagaatcaactggcacaggcactgcgagtgtac
agccagcatgcaaggggggtcgcctttcaaagatacgccttgcagctccatgaggattgc
tacaagttctggagtaacgggcatcagctctgtgaggagcgcagccttacggatcagcac
tgcgtgcacaagtttcatctgctgccaaagccaggagagaagccagaaatggaccataac
ccacctattctataccacaatagcaggggtcgctctacaagttcctgtaactgtggtaag
aagcagtctccaagagaagatccattcgacatccaggctgccaactacgacttctatcaa
atgcttgaggagaaatgttgtggaaagttggagcgcatcaatttcccggtgttccaagcc
agcacacctgaccctgctcctgccagcgatgaggtgcccagacctgtagaggtacctcca
tcgggcgaagctgatcgtctaaaggagaaagagactagcactcacacacctggtgaaagc
acaagtctaagtctcgcccttagcttgggccagtcaacggacagccttggaacatatggt
gatggagcagaaggacaagagaagaggccaagcttggtggacagacagccctccactgtg
gagtatcttcctggcatgcttcattctggatgcccaaaaggactgttgcccaagttctcg
agttggtcccttgttaaactcggtccagctaaggcctataacagtctcactggtttagag
caacctggattcctcccaggctcagctttcctcttgccctgggatgttgtcattcgaagc
cgatcagaggaagatgtgggatcgcttgagcctctagatggaggcccagcctcctggcca
gcaccaaataaagcatccgctggaaagcgaggcagcgctggaggaatcggacgagggcgc
agacgggatgatgtagctcgtgcttttgttggttttgagtatgaggacagcagagggcgc
cgcttctttagttctggccctgataaagttgtcaaagtgcttgggcaaggtggaccaaag
gaacctgcaaccagatgcttaaattctgacatgcctttatacattcactctccagctcaa
ggacgagggatcaagccacactacgctcagctggctcgtctttttgtcgtcgttcctgat
gctcctcttgagattgtcctaaacccacaggtccagccaggtccccctccctgtcctatc
ttccatccggagcaacctgaggtggtgctgccccctgatggactctgggtgctacgcttc
ccttatgcctacgtgacagatcgtggaccatgctaccctccgaaggagaaccagccgctg
gcaaacttcagggtgctgagaggcgttctgcgtgccaacactgctagttcaactccacag
taa
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