Chanodichthys erythropterus (predatory carp): 137028668
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Entry
137028668 CDS
T10334
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137028668 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137028668 (exosc8)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
137028668 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
137028668
NCBI-ProteinID:
XP_067253832
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All DBs
Position
10:complement(40489888..40493912)
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AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNISSISTADGSAMVKIGNTTVIC
GIKAELTMPPSDAPNKGYIVPNVDLPPLCSSKFRPGPPGEQAQAASQFIADVIESSDLIN
MEELCIEKAKLCWVLYCDIMCLDYDGNLLDACIIVLLAALKNAQLPEVTINKETDLAEVD
IQKKRHLKINRHPVGSSFAVFDDSIIIVDPTAEEESLSTALMTVVTDEEDRLCSIHKPGG
TSLSGEKLQHCINRAITRNKEISKLVDKVIGSMKTTK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaaaaccgcagagcctttagaatatcacaggagctttttgaaagaa
aactgtcgtccagatggaagggaattgggagagtttagacccacaaccttaaatattagc
tccatatctacagctgatggatcagcaatggtgaaaattggaaacaccacagtgatttgt
gggataaaagctgaattaactatgccaccctctgatgctccaaataaaggatatatagtc
ccaaatgtagatctgcctccactgtgctcatctaaattcagacccggaccaccaggagaa
caggctcaggcagccagccaatttatcgcagatgtcattgagagttcagatttaataaat
atggaggaattgtgcattgaaaaagctaagctttgttgggtgctgtactgcgatattatg
tgtttggattacgacgggaacttacttgatgcttgcatcatagttttgctggcggcttta
aagaacgcccaacttcctgaagtcactataaacaaagagacagatttagcagaagttgac
atccagaagaagagacacttgaagatcaaccggcacccagtcggctcatcgtttgcagta
tttgatgattccatcatcatcgtcgaccccacggcggaagaggaaagcttgtccacagca
ttaatgactgtggtaacggatgaggaggatcgactctgttccatccacaaaccaggtggg
acgtcgttatccggtgagaaactacaacactgcatcaatcgagccataacgagaaacaaa
gaaatcagcaaactagtggacaaagtcattgggagcatgaagacgacgaaataa
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