Chanodichthys erythropterus (predatory carp): 137028758
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Entry
137028758 CDS
T10334
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137028758 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137028758 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cery04147
]
137028758 (vps36)
Membrane trafficking [BR:
cery04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
137028758 (vps36)
Exosome [BR:
cery04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
137028758 (vps36)
Exosomal proteins of colorectal cancer cells
137028758 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
MA3
Laminin_II
BBL5
Flu_M1_C
V-ATPase_G_2
Motif
Other DBs
NCBI-GeneID:
137028758
NCBI-ProteinID:
XP_067254061
LinkDB
All DBs
Position
10:complement(46895975..46906433)
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AA seq
382 aa
AA seq
DB search
MDRFVWTNGLLEMNETLVIQQRGVRLYDGEDKAKLDVGIVLLSTHRLVWRDQKNHECCIC
IPLSQVIFFEEQAAGIGKSAKIVIHLHPCPENKEPGPYQKSKYSYIKLSFKEHGQIEFYR
RLTEEMTQKRWENTPVSQPIPTGTGPKAGRTRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTQ
YHIQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLTVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacagatttgtttggacaaatgggctccttgagatgaacgaaacgttagtaatccaa
caaagaggagtgagactttacgatggggaagacaaggctaagcttgatgtgggaatcgtt
cttctcagtacccatcgcttagtctggagagaccagaagaatcatgaatgctgtatatgc
atacccttgtcacaggtcatattctttgaggagcaagcagcaggcatcggaaagagtgcc
aagattgtcattcacctgcatccatgccctgaaaataaggagcctggcccctaccagaag
agcaagtactcttatataaagctgtccttcaaggaacatgggcagattgagttttacaga
cgtctaacagaagagatgactcagaagcgatgggagaatacacccgtctcacagccgatc
cccacaggaacaggacccaaggcaggaaggacacgcgcagtgggcattgtgggtattgaa
cggaagttggaggagaaaagaaaagagactgataaaaacatttctgaggcctttgaagat
ctcagtaaactaatggaaaaggccaaagagatggtggagctgtccagatccattgctaac
aaaatcaaagacaaacagggtgacatcacagaagatgagaccatccgtttcaagtcttat
ttgctgagtatgggtatagccaacccagtgaccagggagacacacggctcaggcacacag
taccacatccaacttgccaaacagctgggagacatgctgcaagcaccactggaggagcgt
ggaggaatgatggccctcactgaagtgtactgtctggtgaacagagcccgtgggatggag
cttctctctccggaggacttggtcaatgcctgcaagatgtttgagtcactgaagcttcct
ctacggttgcgagtatttgacagcggggtgatggtggttcaactccagtcccacagtgaa
gaggaaatgattgcctcagctctagataacgtgtctgataaaggctccctcacagctgaa
gagtttgccaagctgttgggactgacagttctccttgctaaagaaaggttgttattagct
gaaaaaatgggtcacttatgccgagacgattcagtagaaggtctgcgattttatcccaac
ctgttctga
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