| Entry |
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| Symbol |
mtrex
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| Name |
(RefSeq) exosome RNA helicase MTR4
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| KO |
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| Organism |
cery Chanodichthys erythropterus (predatory carp)
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| Pathway |
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| Brite |
Enzymes [BR:cery01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137028858 (mtrex)
Messenger RNA biogenesis [BR:cery03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
137028858 (mtrex)
Spliceosome [BR:cery03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
137028858 (mtrex)
Complex C
U4/U6.U5 tri-SnRNP related factors
137028858 (mtrex)
Ribosome biogenesis [BR:cery03009]
Eukaryotic type
Pre-60S particles
Helicases
137028858 (mtrex)
Transfer RNA biogenesis [BR:cery03016]
Eukaryotic type
tRNA degradation factors
TRAMP complex
137028858 (mtrex)
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
10:53268681..53309721
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| AA seq |
1035 aa
MADAFGDDLFSVFDEEQAGSSKKATPKSAAQAGKTPNKADKPQSDSAAVRKRDADNDGPD
EMVLGKRQKLETVSAEEINLSELMPKVKAEQVETVEGCTHEVVLPANEEYTPLKPRVGKA
AKEYPFILDPFQREAILCIDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIK
ALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFD
EIHYMRDSERGVVWEETIILLPDNVHHVFLSATIPNARQFAEWICHLHKQPCHVVYTDYR
PTPLQHYVFPAGGDGLHLVVDENGEFREDNFNTAMQVLRDVGDTGGNTGGKWDPKGRRGG
TKGPSNVFKIVKMIMERNFQPVIIFSFSKKECEAYALQVAKLDFNTDDEKKLVEEVFSNA
TDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLLKALFATETFAM
GINMPARTVLFTSARKFDGKDFRWITSGEYIQMSGRAGRRGMDERGIVIFMVDEKMSPAV
GKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAVPGVVEKMKK
LEEEYNAIRIPNEESVVTYYKIRQQLAKLGKEIEEFIHKPRYCLPFLQPGRLVRVKKEDL
DFGWGVVVNFQKKANVKAGGGDIDPLFVVEVLVHCSKDSVKNAATEAAKPAGPGEKGEMQ
VVPVILHLITSISSVRLYIPKDLRPYENRQSMLKSIQEVQKRFPDGIPLLDPIDDMGIKD
PALKKVIQKVEAFEHRMYTHPLHSDPNLEAVYTLCEKKALIAGDIKAAKRELKRARTVLQ
MDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMVFNGLFNDLTAEQATA
LLSCFVFQENANEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLDVDEDSYLNQFRPHLM
DVVYTWANGSSFSQICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAMGI
TKIKRDIVFAASLYL |
|---|
| NT seq |
3108 nt +upstreamnt +downstreamnt
atggcggacgcctttggagacgatttgttcagcgtgtttgatgaagaacaggccggttcc
agcaaaaaggccactccaaagtccgctgctcaggcagggaagactcctaataaagctgat
aaaccgcagagcgattcagcagctgtccgcaaaagagatgcagacaatgatggtccagat
gagatggtgcttgggaaaaggcaaaagctggaaacagtgtcagctgaggaaatcaatctg
tcagagctcatgcctaaagtgaaggcggagcaggtggagacagtggagggctgcactcat
gaggtggttcttcctgccaatgaggaatacactccgctgaaaccacgtgttggaaaagct
gctaaggagtaccctttcatactcgaccctttccagcgtgaggccatcctgtgcatcgac
aacaaccagtctgtgcttgtgtcggcccacacatcggcaggaaagacagtgtgtgcggaa
tacgccattgctctggcgctcagagaaaagcagcgagtcatcttcaccagtcccatcaag
gctttgagcaatcagaagtacagagagatgtatgaagagttccaggatgtgggtctgatg
accggtgatgtcactattaaccccacagcttcctgtctggtcatgaccactgagattttg
aggagcatgctgtacagagggtcagaggttatgagggaggtggcttgggtcatctttgat
gagatccattacatgagagactcagagcgtggagtggtttgggaggaaaccatcattcta
ctgccggacaatgttcaccatgttttcctgtcagccaccattcccaacgctcgacagttt
gcagagtggatttgtcacctccacaaacagccctgtcacgtggtgtacacagactaccgc
cccactccactgcagcactacgtttttccagcagggggcgatggactccatcttgttgtg
gatgagaacggagagttcagagaagacaattttaatacagctatgcaggtcctgagggat
gtgggggacactggaggcaatactgggggcaaatgggaccccaaaggcagaaggggtgga
accaaaggtccttctaacgtcttcaagattgtaaagatgatcatggaaaggaacttccag
ccggtgatcatctttagcttcagtaagaaagaatgcgaggcctacgcactccaagtggct
aaactggatttcaacacagacgacgagaaaaaactggtggaagaagtgttcagcaatgcc
acagactgcctctctgatgaagataaaaagctgccacaggtagagcatgttctgccattg
ctgaagagaggaattggaattcatcatggcggcctcctcccgatcctcaaagagaccatt
gagatcctgttctctgaggggctgctaaaggccttgtttgctacagaaacatttgccatg
gggatcaacatgcctgctcgaactgtgctcttcaccagtgcgcgcaaatttgatggcaaa
gacttccgttggatcacctctggagagtatatccagatgtcaggacgtgccggcagaaga
ggaatggacgagaggggaatagtcattttcatggtggatgagaagatgagccctgcggtg
ggcaaacagttactgaagggttcggcagaccctctgaacagtgcgtttcacctcacctac
aacatggtgctcaatctactacgtgtggaggagatcaacccagagtacatgctggagaaa
tccttctaccagttccagcactatagagccgtgcctggcgttgtggagaagatgaaaaag
ctggaggaggagtataatgcgatacgaatccccaatgaagagagcgtggtgacctactac
aagatccgtcagcagctggccaaactaggcaaagaaatcgaggaatttattcacaaacct
agatactgcttgcccttcctgcagccaggcagactggtcagggtgaaaaaggaagatctg
gattttggttggggtgtagttgtcaatttccaaaagaaggcaaatgtcaaggccggaggt
ggtgatattgacccgttgtttgtggtggaagttctggttcactgcagcaaagacagtgtg
aagaacgcagccacagaagcagccaaaccagcaggcccaggggaaaagggtgagatgcag
gttgttcctgtgattcttcatctcatcacctctattagctctgtgcgcctgtatatcccc
aaagacctgcggccctacgaaaaccgacaaagcatgctcaaatccatacaggaggtgcag
aaacgtttcccagatggcattccgctgcttgatcccatagacgacatgggtatcaaggat
ccagcactgaagaaggtcattcagaaggtggaggcattcgagcacaggatgtacacgcac
cccctgcacagcgaccccaacctggaggccgtttacacactctgtgagaagaaagcactg
attgcaggggacattaaagcggcgaagcgtgagctgaagagagctcgtaccgtgctgcag
atggacgagctgaagtgcagaaagcgtgtgctgcggcgcttgggattcgccacttcctct
gatgtcatcgagatgaaaggccgtgtggcctgtgagatcagcagtgcagatgagctgttg
ctgacagagatggtgtttaacgggctgttcaatgacctgacggcagagcaggccactgcg
ctcctcagctgcttcgtcttccaggaaaacgctaatgagatgcccaaattgacggagcag
ctggccggaccgctgcgacagatgcaggaatgtgccaagcgaattgctaaggtgtccgca
gaggccaagctggacgtggacgaggactcttacctgaatcagttccgcccacacctgatg
gatgtggtctacacatgggccaatggctcctcattctctcagatatgcaaaatgaccgat
gtgtttgaaggcagtataatccgctgtatgcgcagattggaggagctcttgaggcagatg
tgccaggcggccaaggccattggaaacacggagctggagaataagtttgcaatgggtata
acgaagattaagagggatatcgtgtttgctgccagcctttacttgtga |
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