KEGG   Chanodichthys erythropterus (predatory carp): 137028858
Entry
137028858         CDS       T10334                                 
Symbol
mtrex
Name
(RefSeq) exosome RNA helicase MTR4
  KO
K12598  ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
Organism
cery  Chanodichthys erythropterus (predatory carp)
Pathway
cery03018  RNA degradation
Brite
Enzymes [BR:cery01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     137028858 (mtrex)
Messenger RNA biogenesis [BR:cery03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     137028858 (mtrex)
Spliceosome [BR:cery03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    137028858 (mtrex)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    137028858 (mtrex)
Ribosome biogenesis [BR:cery03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    137028858 (mtrex)
Transfer RNA biogenesis [BR:cery03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    137028858 (mtrex)
SSDB
Other DBs
NCBI-GeneID: 137028858
NCBI-ProteinID: XP_067254266
LinkDB
Position
10:53268681..53309721
AA seq 1035 aa
MADAFGDDLFSVFDEEQAGSSKKATPKSAAQAGKTPNKADKPQSDSAAVRKRDADNDGPD
EMVLGKRQKLETVSAEEINLSELMPKVKAEQVETVEGCTHEVVLPANEEYTPLKPRVGKA
AKEYPFILDPFQREAILCIDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIK
ALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFD
EIHYMRDSERGVVWEETIILLPDNVHHVFLSATIPNARQFAEWICHLHKQPCHVVYTDYR
PTPLQHYVFPAGGDGLHLVVDENGEFREDNFNTAMQVLRDVGDTGGNTGGKWDPKGRRGG
TKGPSNVFKIVKMIMERNFQPVIIFSFSKKECEAYALQVAKLDFNTDDEKKLVEEVFSNA
TDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLLKALFATETFAM
GINMPARTVLFTSARKFDGKDFRWITSGEYIQMSGRAGRRGMDERGIVIFMVDEKMSPAV
GKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAVPGVVEKMKK
LEEEYNAIRIPNEESVVTYYKIRQQLAKLGKEIEEFIHKPRYCLPFLQPGRLVRVKKEDL
DFGWGVVVNFQKKANVKAGGGDIDPLFVVEVLVHCSKDSVKNAATEAAKPAGPGEKGEMQ
VVPVILHLITSISSVRLYIPKDLRPYENRQSMLKSIQEVQKRFPDGIPLLDPIDDMGIKD
PALKKVIQKVEAFEHRMYTHPLHSDPNLEAVYTLCEKKALIAGDIKAAKRELKRARTVLQ
MDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMVFNGLFNDLTAEQATA
LLSCFVFQENANEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLDVDEDSYLNQFRPHLM
DVVYTWANGSSFSQICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAMGI
TKIKRDIVFAASLYL
NT seq 3108 nt   +upstreamnt  +downstreamnt
atggcggacgcctttggagacgatttgttcagcgtgtttgatgaagaacaggccggttcc
agcaaaaaggccactccaaagtccgctgctcaggcagggaagactcctaataaagctgat
aaaccgcagagcgattcagcagctgtccgcaaaagagatgcagacaatgatggtccagat
gagatggtgcttgggaaaaggcaaaagctggaaacagtgtcagctgaggaaatcaatctg
tcagagctcatgcctaaagtgaaggcggagcaggtggagacagtggagggctgcactcat
gaggtggttcttcctgccaatgaggaatacactccgctgaaaccacgtgttggaaaagct
gctaaggagtaccctttcatactcgaccctttccagcgtgaggccatcctgtgcatcgac
aacaaccagtctgtgcttgtgtcggcccacacatcggcaggaaagacagtgtgtgcggaa
tacgccattgctctggcgctcagagaaaagcagcgagtcatcttcaccagtcccatcaag
gctttgagcaatcagaagtacagagagatgtatgaagagttccaggatgtgggtctgatg
accggtgatgtcactattaaccccacagcttcctgtctggtcatgaccactgagattttg
aggagcatgctgtacagagggtcagaggttatgagggaggtggcttgggtcatctttgat
gagatccattacatgagagactcagagcgtggagtggtttgggaggaaaccatcattcta
ctgccggacaatgttcaccatgttttcctgtcagccaccattcccaacgctcgacagttt
gcagagtggatttgtcacctccacaaacagccctgtcacgtggtgtacacagactaccgc
cccactccactgcagcactacgtttttccagcagggggcgatggactccatcttgttgtg
gatgagaacggagagttcagagaagacaattttaatacagctatgcaggtcctgagggat
gtgggggacactggaggcaatactgggggcaaatgggaccccaaaggcagaaggggtgga
accaaaggtccttctaacgtcttcaagattgtaaagatgatcatggaaaggaacttccag
ccggtgatcatctttagcttcagtaagaaagaatgcgaggcctacgcactccaagtggct
aaactggatttcaacacagacgacgagaaaaaactggtggaagaagtgttcagcaatgcc
acagactgcctctctgatgaagataaaaagctgccacaggtagagcatgttctgccattg
ctgaagagaggaattggaattcatcatggcggcctcctcccgatcctcaaagagaccatt
gagatcctgttctctgaggggctgctaaaggccttgtttgctacagaaacatttgccatg
gggatcaacatgcctgctcgaactgtgctcttcaccagtgcgcgcaaatttgatggcaaa
gacttccgttggatcacctctggagagtatatccagatgtcaggacgtgccggcagaaga
ggaatggacgagaggggaatagtcattttcatggtggatgagaagatgagccctgcggtg
ggcaaacagttactgaagggttcggcagaccctctgaacagtgcgtttcacctcacctac
aacatggtgctcaatctactacgtgtggaggagatcaacccagagtacatgctggagaaa
tccttctaccagttccagcactatagagccgtgcctggcgttgtggagaagatgaaaaag
ctggaggaggagtataatgcgatacgaatccccaatgaagagagcgtggtgacctactac
aagatccgtcagcagctggccaaactaggcaaagaaatcgaggaatttattcacaaacct
agatactgcttgcccttcctgcagccaggcagactggtcagggtgaaaaaggaagatctg
gattttggttggggtgtagttgtcaatttccaaaagaaggcaaatgtcaaggccggaggt
ggtgatattgacccgttgtttgtggtggaagttctggttcactgcagcaaagacagtgtg
aagaacgcagccacagaagcagccaaaccagcaggcccaggggaaaagggtgagatgcag
gttgttcctgtgattcttcatctcatcacctctattagctctgtgcgcctgtatatcccc
aaagacctgcggccctacgaaaaccgacaaagcatgctcaaatccatacaggaggtgcag
aaacgtttcccagatggcattccgctgcttgatcccatagacgacatgggtatcaaggat
ccagcactgaagaaggtcattcagaaggtggaggcattcgagcacaggatgtacacgcac
cccctgcacagcgaccccaacctggaggccgtttacacactctgtgagaagaaagcactg
attgcaggggacattaaagcggcgaagcgtgagctgaagagagctcgtaccgtgctgcag
atggacgagctgaagtgcagaaagcgtgtgctgcggcgcttgggattcgccacttcctct
gatgtcatcgagatgaaaggccgtgtggcctgtgagatcagcagtgcagatgagctgttg
ctgacagagatggtgtttaacgggctgttcaatgacctgacggcagagcaggccactgcg
ctcctcagctgcttcgtcttccaggaaaacgctaatgagatgcccaaattgacggagcag
ctggccggaccgctgcgacagatgcaggaatgtgccaagcgaattgctaaggtgtccgca
gaggccaagctggacgtggacgaggactcttacctgaatcagttccgcccacacctgatg
gatgtggtctacacatgggccaatggctcctcattctctcagatatgcaaaatgaccgat
gtgtttgaaggcagtataatccgctgtatgcgcagattggaggagctcttgaggcagatg
tgccaggcggccaaggccattggaaacacggagctggagaataagtttgcaatgggtata
acgaagattaagagggatatcgtgtttgctgccagcctttacttgtga

DBGET integrated database retrieval system