Chanodichthys erythropterus (predatory carp): 137028876
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Entry
137028876 CDS
T10334
Symbol
rc3h2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137028876 (rc3h2)
04121 Ubiquitin system [BR:
cery04121
]
137028876 (rc3h2)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
137028876 (rc3h2)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137028876 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-CCCH
zf-RING_5
zf-RING_UBOX
zf-CCCH_4
zf-RING_2
zf_CCCH_4
zf-CCCH_UNK
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
137028876
NCBI-ProteinID:
XP_067254307
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All DBs
Position
10:54003276..54030258
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AA seq
1044 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDACSHKPISLGCSHTVCKTCLHKLHRKACPFDQTAISTD
IDVLPVNCALLQLVGAPVPEGEIVSVGSAEDTRHYEVCRMCVEELALYLKPISGGKGVVT
LSQSSLSRPMQRKLVTLVNCQLVEEEGRMRAVRACRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLMHKSHMQSIIDKLQSPESFAKSVQELTIILQRTGDPANLNSLRAPLELLASI
DHNPDAAAPSWAELESVLLAVKVVVHGLVEFIQNFSKKSNESPQAQPNSKYKTSMCRDLR
QQGGCPRGASCTFAHTQEELEKHRMRNRKASGVVRPFLSVPAVMPKAGTKGAVPGSEVGT
GGLKNHEKEDASPTQLIPRGGDHQEDKTLPNGANGLHTTSLEQNPISHSQSSAIASVMSI
EEGLLKHGPVLTRAHPEIYHSQDQRTYDLSPYHQPAIPPHRPCSARFHRSSNVTESMLPP
SMGPLYPDQHSSIPPSDRLGPGPYGPPSTYTSISQAHAHGMYTPVYDSRRVWRPPLYPRE
GGRSNSLPPEVFHSSVYQPPLRERYNSLDSPYCSTAEQRAAMHRDAYSRVPLGYEELYRH
KQEQWAHHHGNMNRPSQSSPVFTVDVCSEHPEGVGGGRMTCKCHGGEDSLAHYSPWSCST
ISPFESEPHHLSTHSCSKQIDGESGGKRWLHMFEPYRRLKDEDPIIPFGEGPIISKWGAI
SRASRTGFHTTDPVQATASQGCAGTTSINFRDYGCHIGHSDLRWGPRGSDSSSHSSFLES
DQLAVSGLHVRCNSFSAGSKQGTDLLGKDGTESEPDRDIELELSALDMEDSETQDCNSED
SIETQSRSQNSHLSTVFGDPASSSQLENNLPDRMDTHLMKKMAFRKTLSPGGLNMGKMQM
RTCSPRPGDPPRPSPGPEMLLNGK
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggcagctcaatggactgagtttctatcctgccccatctgctacaatgag
tttgacgcctgcagccacaagcccatcagcctgggctgctcgcacaccgtctgcaagacc
tgcctgcacaaactgcaccgcaaagcctgtccttttgaccagacggccattagcactgac
attgatgtgctgcctgtcaactgtgctctcctgcagctggtgggggcgccggttccggag
ggagagattgtgagtgtgggcagtgctgaagacacgagacattatgaagtgtgcaggatg
tgtgtggaggagctggcactgtatctcaaaccaatcagtggaggaaaaggtgtagtgacc
ctcagtcagagctcgctcagtaggcccatgcagaggaagctggtgaccctcgtgaactgc
cagctggttgaggaggaggggcgtatgcgggcggtcagggcgtgcaggtctctgggtgag
cgcactgtcaccgaactgatcctgcagcaccagaacccacagcagctctccgccaactta
tgggccgctgtgcgggcacgcggctgccagttccttggacctgccatgcaggaagatgct
ttgaagctggtgctgctggccctggaggatggctcggctctctcgcggaaggttctggtg
ctgtttgtggtgcagaaactggaagcgcggttccctcaggcatctaagaccagcattggt
cacgtagttcagctgctgtaccgcgcctcctgctttaaggtgaccaaacgtgatgaagac
tcctcgctcatgcagctcaaagaggagtttcgctcttacgaagccctacgccgcgaacac
gacgctcagattgttcacatcgccatggaagcgggactgcgtatctcacccgagcagtgg
tcatctctgctgtacggggatctcatgcataaatctcacatgcagtcaatcatagacaag
cttcaatccccagaatcctttgcaaagagcgtgcaggagctcaccataatcctgcagaga
acaggagacccagccaacctcaacagcctcagagctcctctcgagctgctggccagcatc
gaccacaaccctgatgcggctgctccatcctgggcagagctggagagcgtgttattggcc
gtgaaggttgttgtccacgggctggtggaattcatccaaaacttcagcaagaagagcaat
gaaagccctcaggctcaaccgaacagcaagtacaagacgagtatgtgcagggacttgcgg
cagcagggcggttgtccgagaggggccagttgcacttttgcccacacgcaggaggagctt
gagaagcacagaatgaggaataggaaagctagtggggtggtgaggcccttcctgtcagta
cccgcagttatgccaaaagctggcaccaaaggagcagtcccagggtcagaggtgggcacc
ggagggctgaagaaccatgagaaagaggatgcgtctcccactcagctcatcccaagagga
ggagaccaccaggaggacaaaactcttcccaatggtgctaacggactgcatactacaagc
ctagaacaaaatcccattagtcacagccagtcttctgcgatagcttcggtaatgtctata
gaggaaggtctcctcaaacacggacccgtcctcacgagagctcatcctgagatataccac
tctcaggaccagagaacatatgacctgtcaccctaccaccaacctgccattcctcctcac
aggccatgcagtgctcgcttccatcgttccagcaacgtgactgagtccatgttaccccct
tcaatgggccctctgtacccagatcagcactcctctattcctccttcagacagattaggc
cccggcccttatgggccaccctctacctacacctctatttcccaggctcacgcacatggc
atgtatacccccgtctatgacagcaggcgtgtttggaggccaccgctgtaccctagggag
ggcgggaggagtaactctctccctcctgaggtttttcattcctccgtctaccagccgccg
ctccgggagcgctacaactcactggacagcccctactgcagcacagcggagcagagagcg
gcaatgcatagggacgcatactcccgtgttcctcttggctatgaggaactctatcgccac
aaacaggaacagtgggcacatcaccacggcaacatgaacaggccctcccagtcctctcca
gtcttcactgtggatgtgtgttcagagcatcctgagggtgtaggtggtgggcgtatgact
tgtaagtgtcatggtggagaagacagtcttgcccactactcgccctggtcgtgcagcacc
atcagcccatttgagtcagagccccaccatttgtcaacccactcctgttccaaacagata
gacggggagagtggtggcaaacggtggctgcacatgtttgaaccctaccggcgactgaaa
gacgaggatcccatcattccttttggagaggggcccatcatctctaagtggggagccatc
tcccgggcttcccgcactggctttcacaccactgacccggtccaggccactgcatcgcag
gggtgcgccggcaccacatcaatcaactttagagactatggctgtcatattggtcacagt
gacctcagatggggtccacgtggttctgattcctctagtcactccagctttctagagagc
gatcagctggccgtgtccgggctgcatgtaagatgtaattccttcagcgccgggtcaaag
cagggcacagatctgctggggaaggatggaacggagagtgagcctgacagagacatcgag
ctggagctgtccgcgctggacatggaggactcagagacacaggactgcaactctgaggac
tcaattgaaacgcaaagccgctcccagaacagccacctctctacagtctttggtgatcca
gcatccagttctcagttggaaaacaacctgcctgacagaatggacactcaccttatgaag
aagatggcattcagaaaaaccctctctcctggaggcctcaatatggggaagatgcagatg
aggacatgctcgcccaggcccggagaccctccacgacccagtccaggacctgagatgctg
ctaaatgggaaatga
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