Chanodichthys erythropterus (predatory carp): 137028952
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Entry
137028952 CDS
T10334
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cery03021
]
137028952 (chd1)
03036 Chromosome and associated proteins [BR:
cery03036
]
137028952 (chd1)
Transcription machinery [BR:
cery03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
137028952 (chd1)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
137028952 (chd1)
SLIK complex
137028952 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
137028952
NCBI-ProteinID:
XP_067254502
LinkDB
All DBs
Position
10:complement(59018173..59047185)
Genome browser
AA seq
1792 aa
AA seq
DB search
MDARSEDESVSNSSGESSNSDDESGSGSGSASGSSSSSSSSSSSQSGSSDSGSGSDSGSQ
SDSDSEKSKEKNDQDNKIDGAAFWKSNPSILTVQRSAMIRKQQLQQQQQIQPQSSSNTGS
DEDSSSSDESDDDSKSRSKGSGSDSDSGSGSGSGSSDSSAEENSDESVSDYEPSHKVKSR
KPSNKANARNGRNNKAPKKKPSRSSSDDEDDYKKALAGPRRQATVNVSYKEDEELKTDSD
DLVEVCGEDVPPPEEDEFETLERVMEMRIGRKGATGAVTTVYAVEADGDPNANFDHNRQP
GEVQYLIKWKNWSHIHNTWETEETLKQQNVKGMKKLDNFKKKEQEKKKWLKAASPEDVEY
FNCQQELMDDLHSQYQIVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWEDGALIARKF
QKCIDEYMCRNQSKSIPFRDCKVLKQRPRFVPMKKQPLYIGGDGLELRDYQLDSLNWMAH
SWCKGNSCILADEMGLGKTIQTISFLNYMFNDHQLYGPFLLVVPLSTLTSWQREIHLWAP
QMNVVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGNVSWAFIGVD
EAHRLKNDDSLLYKTMMEFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSWELFEEE
HGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAVQKQYYKWILTRNY
KALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNRQEGLQHLIRNSGKLVLLD
KLLVRLKERGHRVLIFSQMVRMLDILAEYLKYRQFLFQRLDGSIKGEMRKQALDHFNADG
SEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVT
KGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSTPFNKEELSAILKFGAE
ELFKEQEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFSMMEDEEIDM
DTERNVKNWDDIIPEEQRRRLEEEERQKELAEIYLLPRMRKCAKQINFNGNEGRRSRNRR
YSGSDSDSVSDRKRPKKRGRPRTIPRENIKGFTDAEIRRFIKSYKKFGGPLERLDAIARD
AELVDKSEHDLRRLAETVHNGCLRTLRENPCGPERTSGGRRGKVKGPTFRISGVQVNAKL
VISHEEELAPLHKAIPADPEERKRYIIPCHSKAAHFDIEWGKEDDSSLLIGIYEYGYGSW
EMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQKQAGTANSRK
RKPRGKKNKAVKPKIDDVTNSLSSAPPSDKSSEEEDEKEEEEKETPPVKPPNRRARVSER
AVKEEEEEEDEEESDEDEFEDKEPVEKDVPEKVVKKEIKKEKKEEGRDSKEREPKEKELK
PEPVHREEESPAEAVEVKAEVREKKADTPVHTPTGGDAIPLSEESEELDQKTFSVCKERM
RPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLREYTNPEQIKQWRKNLWIF
VSKFTEFDARKLHKLYKHAIKKRQENAQAMEQNTSTVNTQSFKHADVERIKESQQDDSSR
DSYSSDRHHSSRYHEHSKERHPADLYRKSSDSRKRPYSSFSNGKDHRERERERDQYGERG
ERQDSRYYSDSKHRKLDEHRSSREHRSESNSKDRTHSEHRFHSEHRPGSDYTHHKSSRDY
RYHSDWQMEHRLSGSGPRSPRDQRSPLGHRSPFEYSSDHKSTPEQVWSSRKT
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacgcagtgaggatgaaagtgtcagcaacagcagcggagagtccagtaattca
gatgatgagtctgggtcaggatcgggttctgcctcaggctcaagttcaagcagtagcagt
tctagcagtagccaatcagggagcagtgactcaggaagtggctcggattctggaagccaa
tcagactcggactccgagaaatccaaggaaaagaatgatcaagacaacaaaattgatgga
gcagcgttttggaagtccaaccctagtatcctgacagtacaaaggtcagccatgatcagg
aagcaacagctacagcaacagcagcagatccaaccgcagagctcttcaaacactggctca
gatgaggactcttccagtagtgatgagtcagatgatgactcaaagagcaggagtaaaggg
tctggatcggactctgactcgggatcgggttcaggaagtggctcatcggactcttcagca
gaggagaacagtgacgagtcggtgtcagactatgagcccagtcacaaagtcaagagcaga
aaaccttcaaacaaggccaatgccaggaatgggagaaataacaaagctcccaagaagaag
ccctcccgctcctcctcagatgatgaggacgattataaaaaagcactagcggggcctcgg
cggcaggccacagtcaatgtgagctacaaagaagatgaggaactgaagactgattctgat
gacctggtggaggtgtgtggagaggacgtcccgccaccagaggaggacgagtttgagaca
ctggagagagtcatggaaatgagaataggtcgaaaaggagcaacgggggctgtaaccaca
gtgtatgccgtagaggcagatggagaccccaatgccaactttgaccacaacagacagcca
ggagaggtgcaatacttgatcaaatggaagaactggtcccacattcacaacacctgggag
acagaggagacgctcaaacaacagaatgtcaagggcatgaagaaactggacaacttcaag
aaaaaagagcaggagaagaagaaatggctcaaagcagcctcacctgaggatgtggagtac
ttcaactgtcagcaagaactcatggatgacttgcattctcaatatcaaattgtggaaaga
attattgggcattcaaatcaaaagtctgccgcaggttatccagattacctttgtaaatgg
caggggctgccatactctgagtgcagttgggaagacggtgctcttattgctagaaagttt
caaaaatgcatcgatgaatacatgtgccggaaccaaagcaaatccatccccttcagagac
tgcaaggttttaaaacagagaccacggtttgtacccatgaagaagcagcctctctacatt
ggtggagatggcttagaactgcgagattatcagttggacagtctgaactggatggcccat
tcctggtgcaagggaaacagttgtattttggcagatgagatgggtctgggcaaaaccatc
cagaccatcagtttcctcaattacatgttcaatgaccaccagctttacgggccctttctt
ctggtggtgcctctgtctaccctcacatcctggcagagggagatccatctctgggctcct
cagatgaatgttgtggtgtacctgggagacatcaacagcagaaatatgatccggacacat
gaatggatgcatccgcagaccaagcgactgaagttcaacattctgcttactacatatgaa
attctgctgaaggataagtcatttttaggaaatgtcagctgggcgttcattggtgtcgac
gaggcccatcggcttaagaacgatgactctcttctctacaagactatgatggagttcaag
tccaaccacaggctcctgatcactggcacacccctccagaactcactcaaagagctatgg
tctcttctacactttattatgcctgaaaaatttcactcgtgggagctgtttgaagaggaa
catgggaagggcagagactcaggctataccagccttcataaagagctggagcctttcctg
ctgcgcagagtgaagaaagatgtggagaaatctttgcctgccaaggtggagcagatcctc
agggtagagatgagcgctgttcagaaacaatactacaagtggatattgacaagaaactat
aaagccctgagtaaaggcactaaaggaagcacgtcaggcttcctcaacatcatgatggag
ttgaagaaatgctgtaaccactgctacctcattaaaccccctgatgacaacgagttctac
aacagacaagaaggcctacagcaccttattcgcaatagtgggaagctggttcttctggat
aaactgctggttcggctaaaggaacgagggcaccgtgtgctcatcttctcccaaatggtt
cggatgctggacatcctagcggagtacctaaagtaccggcagttcttattccagcgactg
gatggttccataaagggtgagatgaggaagcaggcattggatcactttaatgctgatggc
tctgaggatttctgcttcttgttgtccacgcgagcgggtggtctaggcattaatctggcc
tctgcagatacggtggtcatttttgactctgactggaaccctcagaatgacctgcaggcc
caggccagagctcacaggattggtcagaaaaaacaggtgaatatataccgtctggtgaca
aagggctcagttgaggaggacattattgagagagccaagaagaaaatggtgttggatcac
ttggtgattcagaggatggacaccacgggaaagacagtccttcatacgggtgctgctcct
tcaagttccactccattcaacaaggaggaactgtcagccatcctgaagtttggtgctgaa
gaacttttcaaagagcaggaaggagaggagcaggaacctcaggagatggatattgatgaa
atcctgaaaagagcagagaccagagagaatgatcctggaccatcgactgtaggagaagag
ctcctctcacaatttaaggtggcgaatttctccatgatggaggatgaggaaattgacatg
gacacggagcggaatgttaagaactgggatgacattatcccagaagaacagcggaggaga
cttgaggaggaggagcgacaaaaagagcttgcagagatctatttactgccccgcatgagg
aaatgtgctaaacagatcaactttaatgggaatgagggcagacgcagccggaacagacga
tactctggttcagacagcgattcggtctccgacagaaagaggcccaagaaacgaggaaga
cctcgaactattccaagagagaacattaaaggtttcactgatgctgagatacgcagattt
atcaaaagttacaaaaaatttggtgggcctttagaaaggctggatgctatcgctcgtgat
gctgaattggtggataaatcggagcatgatctgcggcggctggctgagaccgtacacaac
ggctgtttgagaacgctaagggagaacccctgtggacctgaaagaacctcaggaggcagg
cgagggaaggtgaagggacccactttcaggatctctggggttcaagtcaatgctaagctg
gtgatctctcatgaggaggagctggcaccattacacaaggccattcctgctgacccagag
gagaggaagaggtatataatcccatgccactcaaaggcagctcattttgacattgagtgg
ggtaaagaggatgactccagcctgcttattggaatctatgagtatggatatggaagctgg
gaaatgattaagatggacccagacctcaacctcacacataagctccttccagatgatcct
gacaagaaaccacaggccaaacagctgcagacacgagctgactacctcatcaaattactg
agcaaagacctcgctaagaaggaagcacagaaacaggctggcacggcaaattcacgcaag
agaaaaccacggggcaaaaagaataaagctgtaaaaccgaagattgatgatgtgacaaac
agtctgtcctctgcaccgccatcggataagagctctgaagaagaggatgagaaagaggaa
gaggagaaggaaactcctccagtgaagccacccaacagaagagcacgcgtgtcagagcgg
gcagtaaaagaggaggaagaggaggaggacgaggaagagtctgatgaggatgagtttgag
gataaagagccagttgagaaggatgtaccagagaaagtggttaagaaagagattaagaag
gagaagaaagaggagggccgtgacagcaaagagagggaacccaaagagaaggagctgaag
ccagagcctgtacatcgagaggaagaatctcctgcagaggctgtagaggtgaaagcagaa
gtgcgggaaaagaaggctgacacccctgtgcacacgcccacaggaggagatgcaattcct
ctgtctgaggagtctgaagaactggaccagaaaaccttcagcgtgtgtaaggagcgcatg
agacctgtgaaggcagcactgaagcagttggatcgtccagagaaggggctatctgagcga
gagcagctggaacatacgcggcaatgcctgatcaaaataggagatcatatcactgagtgt
ctgagagaatacaccaaccccgaacagatcaaacagtggaggaaaaatctgtggatattt
gtttcgaaattcactgaatttgatgcaaggaaactgcataaactgtataagcacgccatc
aagaaaagacaagaaaatgctcaggcaatggagcagaacactagcactgtaaatacacaa
agctttaaacacgcagatgttgagcggataaaggagtcacagcaggatgacagcagcaga
gacagctacagctctgacagacatcattcatctcgctaccatgaacacagcaaagaacgt
caccctgccgacctgtacaggaagagctcagactccaggaagagaccctactcctccttc
agcaacggcaaagaccatcgagagcgagagagagagagagaccagtacggagaaagagga
gagcgacaggacagcaggtactacagtgacagcaagcacaggaagctggacgagcaccgc
tccagcagagagcaccgatcagaaagcaactccaaggaccgaacgcactccgaacaccgc
tttcactctgagcaccggcccggctccgactatacgcatcacaaatcgtcccgggactac
cgctaccattcggactggcagatggagcaccggctgtcagggagcggcccgcgctcgccc
cgagaccagcgctcgccgctcggacaccgctcgccctttgagtactcgtccgaccacaaa
agcacacccgaacaggtctggagcagccgcaagacataa
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integrated database retrieval system
