Chanodichthys erythropterus (predatory carp): 137029039
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Entry
137029039 CDS
T10334
Symbol
pdgfba
Name
(RefSeq) platelet-derived growth factor beta polypeptide a
KO
K17386
platelet-derived growth factor subunit B
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04010
MAPK signaling pathway
cery04020
Calcium signaling pathway
cery04510
Focal adhesion
cery04518
Integrin signaling
cery04540
Gap junction
cery04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137029039 (pdgfba)
04020 Calcium signaling pathway
137029039 (pdgfba)
09133 Signaling molecules and interaction
04518 Integrin signaling
137029039 (pdgfba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137029039 (pdgfba)
04540 Gap junction
137029039 (pdgfba)
09142 Cell motility
04810 Regulation of actin cytoskeleton
137029039 (pdgfba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cery04052
]
137029039 (pdgfba)
00536 Glycosaminoglycan binding proteins [BR:
cery00536
]
137029039 (pdgfba)
Cytokines and neuropeptides [BR:
cery04052
]
Cytokines
Growth factors (RTK binding)
137029039 (pdgfba)
Glycosaminoglycan binding proteins [BR:
cery00536
]
Heparan sulfate / Heparin
Growth factors/receptors
137029039 (pdgfba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
137029039
NCBI-ProteinID:
XP_067254646
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All DBs
Position
10:8023511..8037287
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AA seq
489 aa
AA seq
DB search
MMSSRLLLLVLAALAACLRSGRAQGDPLPPSLVDLVMNSPISSVDDLKRLLDVESVEEDD
EIPENEMHSNGTHRRLPRSLSVQVAQQAMCKVRTEVMEVTRAMLDRRNANFLLWPPCVEV
QRCSGCCNTRIVQCVPVTIETRHLQMTKIQIINRQPVYEKVIIPVEDHVTCSCQSRVSAH
SPRLQTTTLALPRPHPKVTLPKSQSKEELHRNDELKHNQRLHLEDKESQELQWQSKNTVT
HTQGYQQSPYQHTISHTPVYVSRGDAPTKQTTLGDPHMMSDATQTEEVDHMKSEHSGDGM
AKKTQQHYDKHLQEDQQPRPPQPQDKTTPQQPKYNLSHNPVQSGHSIPQSSKLDTFSHTY
SHVEVIGQSSGLSEVLNHHSDQSEVGKQHHHHHHQSEASNQNMQEKEQQQEIQHHLRHQH
HRHHQLHQHTTQAVSQQQTTTQKTVTKAPPTTPSAPQTPPPLQPPRKRRRKHRKRMSKAS
MRAMIMVMS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctcgcggcttctgctgctggtgctcgcggcgctcgcagcgtgcctgcggtct
ggtcgcgcgcagggggaccctctccctccatctctggtggatttagtgatgaacagcccg
atctcatccgtagatgatctgaagagacttctggacgtagaatccgtagaggaagatgat
gagatacccgagaatgagatgcactctaacggaacacacagacgtcttcccagaagcctt
agcgttcaggtggcccagcaggccatgtgcaaggtgagaacagaagttatggaagtgacc
cgtgcaatgctggacagacgtaatgccaacttcctgttatggcctccgtgtgtggaagtg
cagcgctgctcaggctgctgcaacacacgaattgtacaatgtgtgccggtcaccatagaa
acacgacatttacagatgacgaaaatccagattatcaaccgacaaccagtctatgagaag
gttatcatacctgtggaggaccatgtgacttgcagctgtcaatcacgtgtttctgcgcac
agcccacggctccaaaccacgactcttgctctgcccagaccccaccctaaagtaacgcta
ccaaagagccaatcgaaagaggagctacatcgcaatgatgaacttaaacataatcaaagg
ctccatttggaggataaagagagtcaggaactacaatggcagtcaaaaaacacagtcaca
cacacacagggctaccaacaaagcccgtaccaacatacaatatcacacacgccagtttat
gtgagcagaggagatgctcccaccaaacaaaccacattaggagatccacacatgatgagt
gatgcaacacaaacagaggaggtcgatcacatgaagtccgaacacagtggtgacggcatg
gcgaaaaagacgcaacaacattacgacaaacatctgcaagaggatcaacagccaagacca
ccgcaaccacaggataaaacgacaccacagcaaccaaaatacaatctttcccacaatccc
gtccaatcagggcacagcataccacaaagtagcaaattagacacttttagccacacttac
agccatgttgaggtgatcggccaatccagcgggttatcagaagtgctaaatcatcactct
gaccaatcagaagttggaaaacaacaccaccaccaccaccaccaatcagaagcaagtaat
caaaatatgcaggaaaaggaacagcagcaagaaatacaacatcatcttcgtcaccaacac
caccgacatcatcagcttcaccaacatacaacacaagcagttagccaacaacagacaacc
acacaaaaaacagtgactaaagctcctcccaccaccccctcagccccacagactccgccc
cctctccagcccccacggaagcgccgacggaaacatcggaagaggatgagcaaggcctct
atgagagcaatgataatggtaatgtcctga
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